RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 WDR83OSQ9Y284 106 aa11.67□□□□□ -0.54
TRAF1-201ENST00000373887 CEP250Q9BV73 2442 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 MED12Q93074 2177 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 LINC00205P59089 165 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 DTX1Q86Y01 620 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 LY6G6EA0A0G2JKS1 128 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 SRRM5B3KS81 715 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 GAFA1Q96PS6 74 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 U3KQA8 63 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 FER1L5A0AVI2 2057 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 TRAV25A0A0B4J276 109 aa11.66□□□□□ -0.54
TRAF1-201ENST00000373887 TCF15Q12870 199 aa11.65□□□□□ -0.54
TRAF1-201ENST00000373887 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
TRAF1-201ENST00000373887 MYO7BQ6PIF6 2116 aa11.65□□□□□ -0.54
TRAF1-201ENST00000373887 DLEU1O43261 78 aa11.65□□□□□ -0.54
TRAF1-201ENST00000373887 RNF144BQ7Z419 303 aa11.65□□□□□ -0.54
TRAF1-201ENST00000373887 TNFRSF14Q92956 283 aa11.65□□□□□ -0.54
TRAF1-201ENST00000373887 ZNRD1Q9P1U0 126 aa11.65□□□□□ -0.54
TRAF1-201ENST00000373887 C3orf79P0CE67 100 aa11.65□□□□□ -0.55
TRAF1-201ENST00000373887 ID3Q02535 119 aa11.65□□□□□ -0.55
TRAF1-201ENST00000373887 AMN1Q8IY45 258 aa11.65□□□□□ -0.55
TRAF1-201ENST00000373887 CEACAM8P31997 349 aaPredicted RBP11.64□□□□□ -0.55
TRAF1-201ENST00000373887 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
TRAF1-201ENST00000373887 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
TRAF1-201ENST00000373887 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
TRAF1-201ENST00000373887 LINC00477Q96M19 166 aa11.64□□□□□ -0.55
TRAF1-201ENST00000373887 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
TRAF1-201ENST00000373887 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
TRAF1-201ENST00000373887 IGHV3-16A0A0C4DH30 117 aa11.64□□□□□ -0.55
TRAF1-201ENST00000373887 ZC2HC1BQ5TFG8 222 aa11.64□□□□□ -0.55
TRAF1-201ENST00000373887 SYS1-DBNDD2H3BUS1 97 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 IGHG3P01860 377 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 PFN2P35080 140 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 SAA4P35542 130 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 PMVKQ15126 192 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 C1orf194Q5T5A4 169 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 LINC01549A6NIU2 74 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 A0A1B0GWJ7 208 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 CMC4P56277 68 aaPredicted RBP11.63□□□□□ -0.55
TRAF1-201ENST00000373887 PLA2G2CQ5R387 149 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 FGF16O43320 207 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 GLRX5Q86SX6 157 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 LINC01551Q86U37 167 aa11.63□□□□□ -0.55
TRAF1-201ENST00000373887 STPG4Q8N801 248 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 SLC25A16P16260 332 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 SPSB3Q6PJ21 355 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 TRAV12-1A0A0B4J245 112 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 H3BMM0 161 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 DKK1O94907 266 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 MPZP25189 248 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 UBE2WQ96B02 151 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 CGB3P0DN86 165 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 GFI1Q99684 422 aa11.62□□□□□ -0.55
TRAF1-201ENST00000373887 TRBV7-1A0A0A6YYK4 115 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 COLCA2A8K830 154 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 SOCS3O14543 225 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 FAM110DQ8TAY7 271 aaPredicted RBP11.61□□□□□ -0.55
TRAF1-201ENST00000373887 CD5LO43866 347 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 GAGE12JA6NER3 117 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 GAGE1Q13065 139 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 GAGE4Q13068 117 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 GAGE5Q13069 117 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 PNRC2Q9NPJ4 139 aaKnown RBP11.61□□□□□ -0.55
TRAF1-201ENST00000373887 IGKV1D-17A0A075B6S4 117 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 LY6G5BQ8NDX9 201 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 RLFQ13129 1914 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 LINC01559Q495D7 138 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 HAPLN4Q86UW8 402 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 NKAPP1Q8N9T2 125 aa11.61□□□□□ -0.55
TRAF1-201ENST00000373887 HAMPP81172 84 aa11.6□□□□□ -0.55
TRAF1-201ENST00000373887 C9orf139Q6ZV77 190 aa11.6□□□□□ -0.55
TRAF1-201ENST00000373887 PI4KAP42356 2102 aa11.6□□□□□ -0.55
TRAF1-201ENST00000373887 NBL1P41271 181 aa11.6□□□□□ -0.55
TRAF1-201ENST00000373887 TRGV9Q99603 122 aa11.6□□□□□ -0.55
TRAF1-201ENST00000373887 MSMBP08118 114 aa11.6□□□□□ -0.55
TRAF1-201ENST00000373887 TRBV24-1A0A075B6N3 115 aa11.6□□□□□ -0.55
TRAF1-201ENST00000373887 NDUFS6O75380 124 aaKnown RBP11.6□□□□□ -0.55
TRAF1-201ENST00000373887 CD5P06127 495 aa11.6□□□□□ -0.55
TRAF1-201ENST00000373887 NDUFS5O43920 106 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 UBE2V1Q13404 147 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 MORN5Q5VZ52 161 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 TMEM242Q9NWH2 141 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 NXPH4O95158 308 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 RHPN1-AS1Q9BWJ2 59 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 LIME1Q9H400 295 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 F5H768 121 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 ANXA2RQ3ZCQ2 193 aa11.59□□□□□ -0.55
TRAF1-201ENST00000373887 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
TRAF1-201ENST00000373887 SYNJ2BPP57105 145 aa11.58□□□□□ -0.55
TRAF1-201ENST00000373887 KLK9Q9UKQ9 250 aa11.58□□□□□ -0.55
TRAF1-201ENST00000373887 H0YJW9 148 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 CGB7P0DN87 165 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 TCTEX1D4Q5JR98 221 aa11.58□□□□□ -0.56
TRAF1-201ENST00000373887 J3QRE1 110 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms