RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TRGV3P03979 118 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 SMIM6P0DI80 62 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 IER3P46695 156 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 SLC35B1P78383 322 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 Q71RC1 249 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-201ENST00000373548 NOL4LQ96MY1 436 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-201ENST00000373548 SMAD5-AS1Q9Y6J3 95 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 CLPSL1A2RUU4 121 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 PRB4P10163 310 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-201ENST00000373548 PPIFP30405 207 aaKnown RBP15.16■□□□□ 0.02
HDAC1-201ENST00000373548 DEFB112Q30KQ8 113 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 PRNTQ86SH4 94 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 TMEM183AQ8IXX5 376 aa15.16■□□□□ 0.02
HDAC1-201ENST00000373548 ABCA12Q86UK0 2595 aa15.15■□□□□ 0.02
HDAC1-201ENST00000373548 Q5PR19 223 aa15.15■□□□□ 0.02
HDAC1-201ENST00000373548 LRRC75A-AS1Q8N1F1 130 aa15.15■□□□□ 0.02
HDAC1-201ENST00000373548 TMEM75Q8N9X5 138 aa15.15■□□□□ 0.02
HDAC1-201ENST00000373548 AAMDCQ9H7C9 122 aa15.15■□□□□ 0.02
HDAC1-201ENST00000373548 ZNF492Q9P255 531 aa15.15■□□□□ 0.02
HDAC1-201ENST00000373548 DIRC3C9JPN6 131 aa15.14■□□□□ 0.01
HDAC1-201ENST00000373548 IGHV4-31P0DP07 118 aa15.14■□□□□ 0.01
HDAC1-201ENST00000373548 S100A7P31151 101 aa15.14■□□□□ 0.01
HDAC1-201ENST00000373548 ATP6V0BQ99437 205 aa15.14■□□□□ 0.01
HDAC1-201ENST00000373548 MRPL18Q9H0U6 180 aaKnown RBP15.14■□□□□ 0.01
HDAC1-201ENST00000373548 C19orf71A6NCJ1 209 aa15.14■□□□□ 0.01
HDAC1-201ENST00000373548 IZUMO1RA6ND01 250 aa15.14■□□□□ 0.01
HDAC1-201ENST00000373548 S100A2P29034 98 aa15.14■□□□□ 0.01
HDAC1-201ENST00000373548 CIARTQ8N365 385 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-201ENST00000373548 PRSS22Q9GZN4 317 aa15.14■□□□□ 0.01
HDAC1-201ENST00000373548 SNURFLB1AK76 121 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 BUB3O43684 328 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 TPPP2P59282 170 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 RPL19P84098 196 aaKnown RBP15.13■□□□□ 0.01
HDAC1-201ENST00000373548 PSG9Q00887 426 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 GNB1LQ9BYB4 327 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 NAV2Q8IVL1 2488 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 K7EQM0 130 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 BRI3O95415 125 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 IGHV4-59P01825 116 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 RELQ04864 619 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-201ENST00000373548 PSG3Q16557 428 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 MRPL54Q6P161 138 aaKnown RBP15.13■□□□□ 0.01
HDAC1-201ENST00000373548 TSKUQ8WUA8 353 aa15.13■□□□□ 0.01
HDAC1-201ENST00000373548 H3BUA1 57 aa15.12■□□□□ 0.01
HDAC1-201ENST00000373548 RPP21Q9H633 154 aaKnown RBP15.12■□□□□ 0.01
HDAC1-201ENST00000373548 PSG8Q9UQ74 426 aa15.12■□□□□ 0.01
HDAC1-201ENST00000373548 RAB9AP51151 201 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 TMEM136Q6ZRR5 245 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 NUP35Q8NFH5 326 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 OR10D4PQ8NGN7 298 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 HIST1H2BLQ99880 126 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 FASNP49327 2511 aaKnown RBP15.11■□□□□ 0.01
HDAC1-201ENST00000373548 GCN1Q92616 2671 aaKnown RBP15.11■□□□□ 0.01
HDAC1-201ENST00000373548 ZNF785A8K8V0 405 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 ZNF253O75346 499 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 FSHBP01225 129 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 P01737 135 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 FABP4P15090 132 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 NEU1Q99519 415 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 ASCL2Q99929 193 aa15.11■□□□□ 0.01
HDAC1-201ENST00000373548 ZANQ9Y493 2812 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 WDR73Q6P4I2 378 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 KLK15Q9H2R5 256 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 NAT8BQ9UHF3 227 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 ZFP30Q9Y2G7 519 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 DOPEY2Q9Y3R5 2298 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 IGHV3-66A0A0C4DH42 116 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 APOHP02749 345 aaPredicted RBP15.1■□□□□ 0.01
HDAC1-201ENST00000373548 MT-ND6P03923 174 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 CSN1S1P47710 185 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 COX19Q49B96 90 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 CT83Q5H943 113 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 KRTAP1-3Q8IUG1 177 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 ZC2HC1AQ96GY0 325 aa15.1■□□□□ 0.01
HDAC1-201ENST00000373548 A0A087X0K7 114 aa15.09■□□□□ 0.01
HDAC1-201ENST00000373548 HIGD1CA8MV81 97 aa15.09■□□□□ 0.01
HDAC1-201ENST00000373548 ZNF207O43670 478 aaKnown RBP15.09■□□□□ 0.01
HDAC1-201ENST00000373548 TRBV12-3P01733 135 aa15.09■□□□□ 0.01
HDAC1-201ENST00000373548 IGHG4P01861 327 aa15.09■□□□□ 0.01
HDAC1-201ENST00000373548 ARL3P36405 182 aa15.09■□□□□ 0.01
HDAC1-201ENST00000373548 DAZAP1Q96EP5 407 aaKnown RBP15.09■□□□□ 0.01
HDAC1-201ENST00000373548 USMG5Q96IX5 58 aa15.09■□□□□ 0.01
HDAC1-201ENST00000373548 Q96MF0 132 aa15.09■□□□□ 0.01
HDAC1-201ENST00000373548 METTL26Q96S19 204 aa15.09■□□□□ 0.01
HDAC1-201ENST00000373548 ZNF331Q9NQX6 463 aaPredicted RBP15.09■□□□□ 0.01
HDAC1-201ENST00000373548 PRRC2AP48634 2157 aaKnown RBP15.09■□□□□ 0.01
HDAC1-201ENST00000373548 IGHV3OR16-13A0A075B7E8 117 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 IGHV3-74A0A0B4J1X5 117 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 A0A1B0GUS0 222 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 NPIPB6E9PJ23 425 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 PF4V1P10720 104 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 IGFL4Q6B9Z1 124 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 GBGT1Q8N5D6 347 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 ARL6IP6Q8N6S5 226 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 U3KQE9 123 aa15.08■□□□□ 0.01
HDAC1-201ENST00000373548 SERTM2A0A1B0GWG4 89 aa15.08■□□□□ 0
HDAC1-201ENST00000373548 IGLV1-40P01703 118 aa15.08■□□□□ 0
HDAC1-201ENST00000373548 AMBPP02760 352 aa15.08■□□□□ 0
HDAC1-201ENST00000373548 HLA-DMBP28068 263 aa15.08■□□□□ 0
HDAC1-201ENST00000373548 CFHR3Q02985 330 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms