RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 RPL35AP18077 110 aaKnown RBP13.54□□□□□ -0.24
PBX3-202ENST00000373482 KHDC3LQ587J8 217 aa13.54□□□□□ -0.24
PBX3-202ENST00000373482 ACTL10Q5JWF8 245 aa13.54□□□□□ -0.24
PBX3-202ENST00000373482 OR10G4Q8NGN3 311 aa13.54□□□□□ -0.24
PBX3-202ENST00000373482 OR10G9Q8NGN4 311 aa13.54□□□□□ -0.24
PBX3-202ENST00000373482 OR10G7Q8NGN6 311 aa13.54□□□□□ -0.24
PBX3-202ENST00000373482 SH3BGRL3Q9H299 93 aa13.54□□□□□ -0.24
PBX3-202ENST00000373482 OR51M1Q9H341 326 aa13.54□□□□□ -0.24
PBX3-202ENST00000373482 CYTL1Q9NRR1 136 aa13.54□□□□□ -0.24
PBX3-202ENST00000373482 KIR2DL5BA0A0G2JN68 375 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 KIR2DL5BA0A0G2JPC4 375 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 KNCNA6PVL3 124 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 OR7C2O60412 319 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 SNRPCP09234 159 aaKnown RBP13.53□□□□□ -0.24
PBX3-202ENST00000373482 HIST1H1EP10412 219 aaKnown RBP13.53□□□□□ -0.24
PBX3-202ENST00000373482 RAB2AP61019 212 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 FAM122CQ6P4D5 195 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 TMUB2Q71RG4 321 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 KIR2DL5AQ8N109 375 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 KIR2DL5BQ8NHK3 375 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 PAXXQ9BUH6 204 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 CLEC5AQ9NY25 188 aa13.53□□□□□ -0.24
PBX3-202ENST00000373482 H3BQ15 152 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 ZNF253O75346 499 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 PYYP10082 97 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 EIF5AP63241 154 aaKnown RBP13.52□□□□□ -0.25
PBX3-202ENST00000373482 IGFL4Q6B9Z1 124 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 EBLN2Q6P2I7 272 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 FOXI2Q6ZQN5 318 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 RNF182Q8N6D2 247 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 FAM167A-AS1Q96KT0 104 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 SPATA25Q9BR10 227 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 ZNF471Q9BX82 626 aaPredicted RBP13.52□□□□□ -0.25
PBX3-202ENST00000373482 ZNF331Q9NQX6 463 aaPredicted RBP13.52□□□□□ -0.25
PBX3-202ENST00000373482 ZNF586Q9NXT0 402 aa13.52□□□□□ -0.25
PBX3-202ENST00000373482 TRAV8-2A0A0B4J237 113 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 H3BTX0 84 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 UBE2CO00762 179 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 CDC34P49427 236 aaPredicted RBP13.51□□□□□ -0.25
PBX3-202ENST00000373482 PDE6HQ13956 83 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 PSG3Q16557 428 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 TMEM41BQ5BJD5 291 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 ZNF738Q8NE65 137 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 BLNKQ8WV28 456 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 SAT2Q96F10 170 aaPredicted RBP13.51□□□□□ -0.25
PBX3-202ENST00000373482 C20orf173Q96LM9 149 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 TM2D3Q9BRN9 247 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 CSTL1Q9H114 145 aa13.51□□□□□ -0.25
PBX3-202ENST00000373482 SAV1Q9H4B6 383 aaPredicted RBP13.51□□□□□ -0.25
PBX3-202ENST00000373482 TRBV19A0A075B6N1 114 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 SPP1P10451 314 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 HLA-DRB4P13762 266 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 PSG9Q00887 426 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 ZFP69Q49AA0 526 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 AKR1C8PQ5T2L2 129 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 PQLC2Q6ZP29 291 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 TRPT1Q86TN4 253 aaKnown RBP13.5□□□□□ -0.25
PBX3-202ENST00000373482 RNF141Q8WVD5 230 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 HLA-DRB4X5D2U9 266 aa13.5□□□□□ -0.25
PBX3-202ENST00000373482 H3BMM0 161 aa13.49□□□□□ -0.25
PBX3-202ENST00000373482 SLC17A3O00476 420 aa13.49□□□□□ -0.25
PBX3-202ENST00000373482 OR10J4P0C629 311 aa13.49□□□□□ -0.25
PBX3-202ENST00000373482 NBEAP1P0C6P0 100 aa13.49□□□□□ -0.25
PBX3-202ENST00000373482 C4BPBP20851 252 aa13.49□□□□□ -0.25
PBX3-202ENST00000373482 NUTF2P61970 127 aaKnown RBP13.49□□□□□ -0.25
PBX3-202ENST00000373482 UBE2L3P68036 154 aaKnown RBP13.49□□□□□ -0.25
PBX3-202ENST00000373482 LGALSLQ3ZCW2 172 aaPredicted RBP13.49□□□□□ -0.25
PBX3-202ENST00000373482 MORN3Q6PF18 240 aaPredicted RBP13.49□□□□□ -0.25
PBX3-202ENST00000373482 ACTR3CQ9C0K3 210 aaPredicted RBP13.49□□□□□ -0.25
PBX3-202ENST00000373482 AAMDCQ9H7C9 122 aa13.49□□□□□ -0.25
PBX3-202ENST00000373482 COL7A1Q02388 2944 aa13.48□□□□□ -0.25
PBX3-202ENST00000373482 HLA-DMBP28068 263 aa13.48□□□□□ -0.25
PBX3-202ENST00000373482 CD300CQ08708 224 aa13.48□□□□□ -0.25
PBX3-202ENST00000373482 GDF5OSQ5U4N7 250 aa13.48□□□□□ -0.25
PBX3-202ENST00000373482 Q6ZWC4 215 aa13.48□□□□□ -0.25
PBX3-202ENST00000373482 RPP25LQ8N5L8 163 aaKnown RBP13.48□□□□□ -0.25
PBX3-202ENST00000373482 OR4B1Q8NGF8 309 aa13.48□□□□□ -0.25
PBX3-202ENST00000373482 TGP01266 2768 aa13.48□□□□□ -0.25
PBX3-202ENST00000373482 A0A0J9YX75 114 aa13.47□□□□□ -0.25
PBX3-202ENST00000373482 F6UB75 175 aa13.47□□□□□ -0.25
PBX3-202ENST00000373482 DUSP14O95147 198 aaKnown RBP13.47□□□□□ -0.25
PBX3-202ENST00000373482 CA1P00915 261 aaPredicted RBP13.47□□□□□ -0.25
PBX3-202ENST00000373482 SEC11BP0C7V7 166 aa13.47□□□□□ -0.25
PBX3-202ENST00000373482 TPT1P13693 172 aaKnown RBP13.47□□□□□ -0.25
PBX3-202ENST00000373482 DEFB1P60022 68 aa13.47□□□□□ -0.25
PBX3-202ENST00000373482 RAB24Q969Q5 203 aa13.47□□□□□ -0.25
PBX3-202ENST00000373482 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
PBX3-202ENST00000373482 HMGB3O15347 200 aaKnown RBP13.46□□□□□ -0.25
PBX3-202ENST00000373482 BAP18Q8IXM2 172 aa13.46□□□□□ -0.25
PBX3-202ENST00000373482 RPUSD4Q96CM3 377 aaKnown RBP13.46□□□□□ -0.25
PBX3-202ENST00000373482 ZNF503Q96F45 646 aa13.46□□□□□ -0.25
PBX3-202ENST00000373482 CLUHP3Q96NS8 147 aa13.46□□□□□ -0.25
PBX3-202ENST00000373482 RCHY1Q96PM5 261 aa13.46□□□□□ -0.25
PBX3-202ENST00000373482 PRELID1Q9Y255 219 aa13.46□□□□□ -0.25
PBX3-202ENST00000373482 U3KQK5 164 aa13.46□□□□□ -0.25
PBX3-202ENST00000373482 EIF3GO75821 320 aaKnown RBP eCLIP13.45□□□□□ -0.26
PBX3-202ENST00000373482 NDUFB4O95168 129 aa13.45□□□□□ -0.26
PBX3-202ENST00000373482 IGKV3-20P01619 116 aa13.45□□□□□ -0.26
PBX3-202ENST00000373482 STAG3L2P0CL84 134 aa13.45□□□□□ -0.26
PBX3-202ENST00000373482 STAG3L3P0CL85 134 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms