RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 TRBV6-1A0A0K0K1D8 114 aa14.62□□□□□ -0.07
USP49-202ENST00000373010 FAM19A2Q8N3H0 131 aa14.62□□□□□ -0.07
USP49-202ENST00000373010 NRN1Q9NPD7 142 aa14.62□□□□□ -0.07
USP49-202ENST00000373010 CENPVL3A0A0U1RRI6 287 aa14.61□□□□□ -0.07
USP49-202ENST00000373010 PSG3Q16557 428 aa14.61□□□□□ -0.07
USP49-202ENST00000373010 TDRG1Q3Y452 100 aa14.61□□□□□ -0.07
USP49-202ENST00000373010 FAM110DQ8TAY7 271 aaPredicted RBP14.61□□□□□ -0.07
USP49-202ENST00000373010 ALKBH7Q9BT30 221 aaPredicted RBP14.61□□□□□ -0.07
USP49-202ENST00000373010 KRTDAPP60985 99 aa14.61□□□□□ -0.07
USP49-202ENST00000373010 RBPMS2Q6ZRY4 209 aaKnown RBP14.61□□□□□ -0.07
USP49-202ENST00000373010 S100A7AQ86SG5 101 aa14.61□□□□□ -0.07
USP49-202ENST00000373010 VN1R17PQ8TDU5 208 aa14.61□□□□□ -0.07
USP49-202ENST00000373010 G3V318 75 aa14.6□□□□□ -0.07
USP49-202ENST00000373010 K7EQM0 130 aa14.6□□□□□ -0.07
USP49-202ENST00000373010 ZNF324O75467 553 aaPredicted RBP14.6□□□□□ -0.07
USP49-202ENST00000373010 C15orf32Q32M92 178 aa14.6□□□□□ -0.07
USP49-202ENST00000373010 GFRA4Q9GZZ7 299 aa14.6□□□□□ -0.07
USP49-202ENST00000373010 CACNA1AO00555 2505 aa14.6□□□□□ -0.07
USP49-202ENST00000373010 GPR183P32249 361 aa14.6□□□□□ -0.07
USP49-202ENST00000373010 C1orf194Q5T5A4 169 aa14.6□□□□□ -0.07
USP49-202ENST00000373010 ZFP30Q9Y2G7 519 aa14.6□□□□□ -0.07
USP49-202ENST00000373010 NTF3P20783 257 aa14.59□□□□□ -0.07
USP49-202ENST00000373010 RHOGP84095 191 aa14.59□□□□□ -0.07
USP49-202ENST00000373010 PDE6HQ13956 83 aa14.59□□□□□ -0.07
USP49-202ENST00000373010 C16orf54Q6UWD8 224 aa14.59□□□□□ -0.07
USP49-202ENST00000373010 C8orf49Q96NF6 230 aa14.59□□□□□ -0.07
USP49-202ENST00000373010 NDUFAF3Q9BU61 184 aa14.59□□□□□ -0.07
USP49-202ENST00000373010 AAMDCQ9H7C9 122 aa14.59□□□□□ -0.07
USP49-202ENST00000373010 NIT1Q86X76 327 aa14.58□□□□□ -0.07
USP49-202ENST00000373010 TMEM219Q86XT9 240 aa14.58□□□□□ -0.07
USP49-202ENST00000373010 OR4B1Q8NGF8 309 aa14.58□□□□□ -0.07
USP49-202ENST00000373010 ZNF502Q8TBZ5 544 aa14.58□□□□□ -0.07
USP49-202ENST00000373010 RABAC1Q9UI14 185 aa14.58□□□□□ -0.07
USP49-202ENST00000373010 CRIP1P50238 77 aa14.58□□□□□ -0.08
USP49-202ENST00000373010 KLF5Q13887 457 aaPredicted RBP14.58□□□□□ -0.08
USP49-202ENST00000373010 TXN2Q99757 166 aa14.58□□□□□ -0.08
USP49-202ENST00000373010 IGHV4-61A0A0C4DH41 118 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 KIR2DL5BA0A0G2JN68 375 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 KIR2DL5BA0A0G2JPC4 375 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 IGFL4Q6B9Z1 124 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 TEX43Q6ZNM6 134 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 KIR2DL5AQ8N109 375 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 SOX21Q9Y651 276 aaPredicted RBP14.57□□□□□ -0.08
USP49-202ENST00000373010 SMAD5-AS1Q9Y6J3 95 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 SCGB2A1O75556 95 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 RPL7P18124 248 aaKnown RBP14.57□□□□□ -0.08
USP49-202ENST00000373010 TMEM190Q8WZ59 177 aa14.57□□□□□ -0.08
USP49-202ENST00000373010 COL12A1Q99715 3063 aa14.56□□□□□ -0.08
USP49-202ENST00000373010 FAM231BA6NCW3 169 aa14.56□□□□□ -0.08
USP49-202ENST00000373010 CLEC3BP05452 202 aa14.56□□□□□ -0.08
USP49-202ENST00000373010 FOXA3P55318 350 aaPredicted RBP14.56□□□□□ -0.08
USP49-202ENST00000373010 Q8N976 141 aa14.56□□□□□ -0.08
USP49-202ENST00000373010 IGKV2-40A0A087WW87 121 aaPredicted RBP14.56□□□□□ -0.08
USP49-202ENST00000373010 IGKV2D-40P01614 121 aaPredicted RBP14.56□□□□□ -0.08
USP49-202ENST00000373010 PAX8Q06710 450 aa14.56□□□□□ -0.08
USP49-202ENST00000373010 C5orf56Q8N8D9 126 aa14.56□□□□□ -0.08
USP49-202ENST00000373010 CCL19Q99731 98 aa14.56□□□□□ -0.08
USP49-202ENST00000373010 PSG9Q00887 426 aa14.55□□□□□ -0.08
USP49-202ENST00000373010 RNASEKQ6P5S7 137 aaKnown RBP14.55□□□□□ -0.08
USP49-202ENST00000373010 BRD3OSQ6XYD6 125 aa14.55□□□□□ -0.08
USP49-202ENST00000373010 APOHP02749 345 aaPredicted RBP14.55□□□□□ -0.08
USP49-202ENST00000373010 HLA-DMBP28068 263 aa14.55□□□□□ -0.08
USP49-202ENST00000373010 CSN1S1P47710 185 aa14.55□□□□□ -0.08
USP49-202ENST00000373010 IGSF10Q6WRI0 2623 aa14.55□□□□□ -0.08
USP49-202ENST00000373010 VPS13CQ709C8 3753 aa14.55□□□□□ -0.08
USP49-202ENST00000373010 CELSR1Q9NYQ6 3014 aa14.54□□□□□ -0.08
USP49-202ENST00000373010 CLEC19AQ6UXS0 136 aa14.54□□□□□ -0.08
USP49-202ENST00000373010 CCDC140Q96MF4 163 aa14.54□□□□□ -0.08
USP49-202ENST00000373010 PIMREGQ9BSJ6 248 aa14.54□□□□□ -0.08
USP49-202ENST00000373010 PAM16Q9Y3D7 125 aa14.54□□□□□ -0.08
USP49-202ENST00000373010 HSBP1O75506 76 aa14.54□□□□□ -0.08
USP49-202ENST00000373010 C3orf79P0CE67 100 aa14.54□□□□□ -0.08
USP49-202ENST00000373010 ZFAND3Q9H8U3 227 aa14.54□□□□□ -0.08
USP49-202ENST00000373010 M0QZ24 198 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 CHEK1O14757 476 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 KLK9Q2XQG4 91 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 URB1-AS1Q96HZ7 61 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 KLK9Q9UKQ9 250 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 FLNCQ14315 2725 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 TRAV40A0A0B4J280 105 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 IGHV1-69DA0A0B4J2H0 117 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 HAX1O00165 279 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 IGHV1-69P01742 117 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 ARMS2P0C7Q2 107 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 LURAP1LQ8IV03 231 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 C10orf105Q8TEF2 133 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 LINC00527Q9UJ94 153 aa14.53□□□□□ -0.08
USP49-202ENST00000373010 ZFHX3Q15911 3703 aa14.52□□□□□ -0.08
USP49-202ENST00000373010 IGHG4P01861 327 aa14.52□□□□□ -0.08
USP49-202ENST00000373010 VAMP8Q9BV40 100 aa14.52□□□□□ -0.08
USP49-202ENST00000373010 IGHV3-66A0A0C4DH42 116 aa14.52□□□□□ -0.09
USP49-202ENST00000373010 CT45A10P0DMU9 189 aa14.52□□□□□ -0.09
USP49-202ENST00000373010 PIFOQ8TCI5 191 aa14.52□□□□□ -0.09
USP49-202ENST00000373010 LOC102724200A0A096LPH7 203 aaPredicted RBP14.51□□□□□ -0.09
USP49-202ENST00000373010 A0A1B0GUT8 65 aa14.51□□□□□ -0.09
USP49-202ENST00000373010 RNF224P0DH78 156 aa14.51□□□□□ -0.09
USP49-202ENST00000373010 Q8TAT8 98 aa14.51□□□□□ -0.09
USP49-202ENST00000373010 BORCS7Q96B45 105 aa14.51□□□□□ -0.09
USP49-202ENST00000373010 VGLL1Q99990 258 aa14.51□□□□□ -0.09
USP49-202ENST00000373010 TPPP3Q9BW30 176 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms