RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 NXPH1P58417 271 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 LINC00205P59089 165 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 GAGE2AQ6NT46 116 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 FLYWCH2Q96CP2 140 aaKnown RBP8.54□□□□□ -1.04
TRERF1-203ENST00000372917 ZNF503Q96F45 646 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 ZNF576Q9H609 170 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 SLC25A10Q9UBX3 287 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-203ENST00000372917 K7ESF4 209 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 CDX4O14627 284 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-203ENST00000372917 RSPO1Q2MKA7 263 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-203ENST00000372917 RBAKDNA6NC62 111 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 SLC25A20O43772 301 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 CNEP1R1Q8N9A8 125 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 FOXC2Q99958 501 aa8.54□□□□□ -1.04
TRERF1-203ENST00000372917 DEFB108AA8MXU0 73 aa8.53□□□□□ -1.04
TRERF1-203ENST00000372917 PMVKQ15126 192 aa8.53□□□□□ -1.04
TRERF1-203ENST00000372917 TAL2Q16559 108 aa8.53□□□□□ -1.04
TRERF1-203ENST00000372917 FAM27BQ5VT28 67 aa8.53□□□□□ -1.04
TRERF1-203ENST00000372917 TRPT1Q86TN4 253 aaKnown RBP8.53□□□□□ -1.04
TRERF1-203ENST00000372917 TDHQ8IZJ6 230 aa8.53□□□□□ -1.04
TRERF1-203ENST00000372917 DAZAP2Q15038 168 aaPredicted RBP8.53□□□□□ -1.04
TRERF1-203ENST00000372917 LINC00322Q6ZN03 302 aaPredicted RBP8.53□□□□□ -1.04
TRERF1-203ENST00000372917 TMEM219Q86XT9 240 aa8.53□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A10PA6NDY2 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A20PA6NIJ5 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A7PA6NKC0 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A22PA8MWA6 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A12PA8MX19 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A5PA8MXJ8 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A23PA8MXZ1 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 D6R8Y8 96 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A15PP0C7V4 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A13PP0C7W8 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A14PP0C7W9 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 FAM90A24PP0C7X0 464 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 PYYP10082 97 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 CCL4P13236 92 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 ERVK-16P61578 105 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 ZNF493Q6ZR52 646 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.04
TRERF1-203ENST00000372917 PCSK5Q92824 1860 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 COL4A2P08572 1712 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 IGHV3-43A0A0B4J1X8 118 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 IGHV3-43DP0DP04 118 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 SLC25A45Q8N413 288 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 CPAMD8Q8IZJ3 1885 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 NCBP2LA6PVI3 153 aaKnown RBP8.52□□□□□ -1.05
TRERF1-203ENST00000372917 IGHG4P01861 327 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 C8orf88P0DMB2 117 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 HLA-DRB4P13762 266 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 OR11H6Q8NGC7 330 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 HLA-DRB4X5D2U9 266 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 DSCAML1Q8TD84 2053 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 NBASA2RRP1 2371 aa8.52□□□□□ -1.05
TRERF1-203ENST00000372917 ARMS2P0C7Q2 107 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 FGF12P61328 243 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 RIGQ13278 110 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 SPRNQ5BIV9 151 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 COQ2Q96H96 371 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 ODF3Q96PU9 254 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 ZNF256Q9Y2P7 627 aaPredicted RBP8.51□□□□□ -1.05
TRERF1-203ENST00000372917 AKAP6Q13023 2319 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 TRGV11A0A075B6L2 103 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 TRAV40A0A0B4J280 105 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 A0A1B0GUT8 65 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 A0A1B0GX51 115 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 Q8N1Y9 231 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 NPYP01303 97 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 RPL35AP18077 110 aaKnown RBP8.51□□□□□ -1.05
TRERF1-203ENST00000372917 VKORC1L1Q8N0U8 176 aa8.51□□□□□ -1.05
TRERF1-203ENST00000372917 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 DPM2O94777 84 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 ORM1P02763 201 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 SPINK14Q6IE38 97 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 FOXL2NBQ6ZUU3 175 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 BAALCQ8WXS3 180 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 NPIPB3Q92617 1050 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 DEFB127Q9H1M4 99 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 HHLA3Q9XRX5 114 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 IGLV3-32A0A0A0MS00 114 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 SYNGR3O43761 229 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 FAM53AQ6NSI3 398 aaPredicted RBP8.5□□□□□ -1.05
TRERF1-203ENST00000372917 NABP1Q96AH0 204 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 SPTBN1Q01082 2364 aaKnown RBP8.5□□□□□ -1.05
TRERF1-203ENST00000372917 TWIST1Q15672 202 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 SCGB1D4Q6XE38 83 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 PDPNQ86YL7 162 aa8.5□□□□□ -1.05
TRERF1-203ENST00000372917 H7C2G1 150 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 Q6ZSR3 168 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 NDUFA3O95167 84 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 SRSF12Q8WXF0 261 aaKnown RBP8.49□□□□□ -1.05
TRERF1-203ENST00000372917 TRGV9Q99603 122 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 RTL8AQ9BWD3 113 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 TEX49A0A1B0GTD5 131 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 PLAUP00749 431 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 NGFP01138 241 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 LIFP15018 202 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 CRYGSP22914 178 aa8.49□□□□□ -1.05
TRERF1-203ENST00000372917 CFHR1Q03591 330 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms