RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 OR10AG1Q8NH19 301 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 KBTBD11-OT1A0A1B0GTJ5 212 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 SRRM5B3KS81 715 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 F2RL2O00254 374 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 SPRY2O43597 315 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 CGB3P0DN86 165 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 CGB7P0DN87 165 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 GATA1P15976 413 aaPredicted RBP4.31□□□□□ -1.72
ATG4A-204ENST00000372246 GCSHP23434 173 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 CEACAM3P40198 252 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 CRIP1P50238 77 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 UBALD2Q8IYN6 164 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 TMEM186Q96B77 213 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 DAZAP1Q96EP5 407 aaKnown RBP4.31□□□□□ -1.72
ATG4A-204ENST00000372246 GPR82Q96P67 336 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 MLST8Q9BVC4 326 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 RAB1BQ9H0U4 201 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 MSRB1Q9NZV6 116 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 RALYQ9UKM9 306 aaKnown RBP4.31□□□□□ -1.72
ATG4A-204ENST00000372246 SPCS1Q9Y6A9 102 aa4.31□□□□□ -1.72
ATG4A-204ENST00000372246 RAI1Q7Z5J4 1906 aaPredicted RBP4.3□□□□□ -1.72
ATG4A-204ENST00000372246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.3□□□□□ -1.72
ATG4A-204ENST00000372246 IGHV3-35A0A0C4DH35 117 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 TRBV7-9A0A0J9YWB2 115 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 A0A1W2PPI3 338 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 C19orf71A6NCJ1 209 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 TCRAP04437 139 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 AZU1P20160 251 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 EVI2AP22794 236 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 MYCNOSP40205 109 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 ATP5IP56385 69 aaPredicted RBP4.3□□□□□ -1.72
ATG4A-204ENST00000372246 LYZP61626 148 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 HERV-K104P63124 156 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 ATP5G2Q06055 141 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 WFDC2Q14508 124 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 TCTEX1D4Q5JR98 221 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 LINC01545Q5VT33 79 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 RBPMS2Q6ZRY4 209 aaKnown RBP4.3□□□□□ -1.72
ATG4A-204ENST00000372246 FAM231DQ6ZW35 169 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 OR2K2Q8NGT1 345 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 AP1S3Q96PC3 154 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 PSMG3-AS1Q96PY0 264 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 NDUFA4L2Q9NRX3 87 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 AP5S1Q9NUS5 200 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 PRNDQ9UKY0 176 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 MRPS17Q9Y2R5 130 aaKnown RBP4.3□□□□□ -1.72
ATG4A-204ENST00000372246 TMEM265A0A087WTH1 108 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 TCRBV4S1A1TA0A5B7 111 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 C9orf118A6NHY6 69 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 OR11H12B2RN74 326 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 IGKV3-15P01624 115 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 IGLV2-11P01706 119 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 CCL11P51671 97 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 PLP1P60201 277 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 C2orf83Q53S99 150 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 KLF17Q5JT82 389 aaPredicted RBP4.3□□□□□ -1.72
ATG4A-204ENST00000372246 DHRS13Q6UX07 377 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 ZNF788Q6ZQV5 615 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 C1orf210Q8IVY1 113 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 OR11H1Q8NG94 326 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 OR1L4Q8NGR5 311 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 OR11H2Q8NH07 326 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 PPP1R35Q8TAP8 253 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 PRSS22Q9GZN4 317 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 NPFFR1Q9GZQ6 430 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 VCX2Q9H322 139 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 SIGLEC8Q9NYZ4 499 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 WNK2Q9Y3S1 2297 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 TECTAO75443 2155 aa4.3□□□□□ -1.72
ATG4A-204ENST00000372246 A0A1B0GW15 77 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 LINC01548A6NM66 108 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 K7EP34 96 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 TGFAP01135 160 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 IGHV3-23P01764 117 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 LYPD2Q6UXB3 125 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 Q6ZT83 130 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 FA2HQ7L5A8 372 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 Q86TA4 180 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 Q8TAT8 98 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 ARPC1AQ92747 370 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 GAFA1Q96PS6 74 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 YAE1D1Q9NRH1 226 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 TSSC4Q9Y5U2 329 aaPredicted RBP4.29□□□□□ -1.72
ATG4A-204ENST00000372246 ARHGAP32A7KAX9 2087 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 CACNA1HO95180 2353 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 TRAV25A0A0B4J276 109 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 A0A1W2PPM0 123 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 FAM90A9PA6NNJ1 464 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 RBP4P02753 201 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 SP9P0CG40 484 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 GP9P14770 177 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 TNFRSF1AP19438 455 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 HLA-DMBP28068 263 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 CR1LQ2VPA4 569 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 COX19Q49B96 90 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 Q6ZQT7 251 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 GTSCR1Q86UQ5 136 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 MDS2Q8NDY4 140 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 CHCHD1Q96BP2 118 aaKnown RBP4.29□□□□□ -1.72
ATG4A-204ENST00000372246 GUCD1Q96NT3 240 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms