RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 TCF20Q9UGU0 1960 aaKnown RBP12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 IGFBP3P17936 291 aaPredicted RBP12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 COX6B1P14854 86 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 GAS1P54826 345 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 A0A1B0GX51 115 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 COX8AP10176 69 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 NKAPP1Q8N9T2 125 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 COL5A3P25940 1745 aaPredicted RBP12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 H0YIZ8 118 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 CISD3P0C7P0 127 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 SLC25A16P16260 332 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 SPATA31B1PQ5VZV4 182 aa12.64□□□□□ -0.39
GTF3C4-201ENST00000372146 A0A0U1RQV1 116 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 OVOL1O14753 267 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 BHLHA9Q7RTU4 235 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 IGKV1D-13A0A0B4J2D9 117 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 IGKV1-13P0DP09 117 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 PFN2P35080 140 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 RPL36AP83881 106 aaKnown RBP12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 C3orf36Q3SXR2 165 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 PPP1R32Q7Z5V6 425 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 ZIC4Q8N9L1 334 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 RPL36ALQ969Q0 106 aaKnown RBP12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 ZNF497Q6ZNH5 498 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 OR11H6Q8NGC7 330 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 SCRT2Q9NQ03 307 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 DEFB123Q8N688 67 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 IGKV1-8A0A0C4DH67 115 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 Q8TAT8 98 aa12.63□□□□□ -0.39
GTF3C4-201ENST00000372146 USF3Q68DE3 2245 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 EFEMP2O95967 443 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 LINC01590Q5TEZ4 76 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 AMTNQ6UX39 209 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 PAPPA2Q9BXP8 1791 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 TREML4Q6UXN2 200 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 C1orf210Q8IVY1 113 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 C14orf132Q9NPU4 83 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 IGHV3-53P01767 116 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 PRSS47A8MTI9 375 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 PAX8Q06710 450 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 TP53TG1Q9Y2A0 90 aa12.62□□□□□ -0.39
GTF3C4-201ENST00000372146 FOXS1O43638 330 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 CEACAM8P31997 349 aaPredicted RBP12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 FAM104BQ5XKR9 115 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 TECTAO75443 2155 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 F6UB75 175 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 LTBRP36941 435 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 C8orf31Q8N9H6 132 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 ATOX1O00244 68 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 LAIR2Q6ISS4 152 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 CFHR2P36980 270 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 COLCA1Q6ZS62 124 aa12.61□□□□□ -0.39
GTF3C4-201ENST00000372146 SPATA25Q9BR10 227 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 TRAV13-2A0A0B4J235 113 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 B9A039 149 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 CD24P25063 80 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 Q6ZWC4 215 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 LINC00312Q9Y6C7 94 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 CCL25O15444 150 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 MORN2Q502X0 79 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 CDCP2Q5VXM1 449 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 ORMDL1Q9P0S3 153 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 PRCDQ00LT1 54 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 TRBV6-7A0A0A0MS04 114 aa12.6□□□□□ -0.39
GTF3C4-201ENST00000372146 ADAMTS7Q9UKP4 1686 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 LRRC37A2A6NM11 1700 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 IGHV2-26A0A0B4J1V2 119 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 FAM201AQ5SY85 155 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 NMSQ5H8A3 153 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 C3orf56Q8N813 242 aa12.59□□□□□ -0.39
GTF3C4-201ENST00000372146 Q0VG73 95 aa12.58□□□□□ -0.39
GTF3C4-201ENST00000372146 ADCYAP1P18509 176 aa12.58□□□□□ -0.4
GTF3C4-201ENST00000372146 YPEL1O60688 119 aa12.58□□□□□ -0.4
GTF3C4-201ENST00000372146 MUSTN1Q8IVN3 82 aa12.58□□□□□ -0.4
GTF3C4-201ENST00000372146 YPEL2Q96QA6 119 aa12.58□□□□□ -0.4
GTF3C4-201ENST00000372146 FAM216BQ8N7L0 139 aa12.58□□□□□ -0.4
GTF3C4-201ENST00000372146 DAD1P61803 113 aa12.58□□□□□ -0.4
GTF3C4-201ENST00000372146 TMEM141Q96I45 108 aa12.58□□□□□ -0.4
GTF3C4-201ENST00000372146 RFNGQ9Y644 331 aa12.58□□□□□ -0.4
GTF3C4-201ENST00000372146 LIME1Q9H400 295 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 OTOGLQ3ZCN5 2332 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 BSPH1Q075Z2 132 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 C15orf32Q32M92 178 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 TMEM190Q8WZ59 177 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 SIGLEC12Q96PQ1 595 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 ZNF561-AS1K7EIQ3 104 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 TMEM133Q9H2Q1 129 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 C18orf32Q8TCD1 76 aa12.57□□□□□ -0.4
GTF3C4-201ENST00000372146 ZNF329Q86UD4 541 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 PCOLCEQ15113 449 aa12.56□□□□□ -0.4
GTF3C4-201ENST00000372146 LY96Q9Y6Y9 160 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms