RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SORL1Q92673 2214 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 WDR73Q6P4I2 378 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 RNASEKQ6P5S7 137 aaKnown RBP9.25□□□□□ -0.93
PDE6C-201ENST00000371447 TMEM136Q6ZRR5 245 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 STXBP6Q8NFX7 210 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 GPR82Q96P67 336 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 C21orf62Q9NYP8 219 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 A1L4Q6 167 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 BMPR1BO00238 502 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 GDF5OSQ5U4N7 250 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 Q6ZWC4 215 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 BPIFA4PQ86YQ2 179 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 C5orf17Q8NAS9 161 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 CHRDL1Q9BU40 450 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 VWC2LB2RUY7 222 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 INS-IGF2F8WCM5 200 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 ZNF138P52744 262 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 LINC00310P59036 64 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 YPEL3P61236 119 aaPredicted RBP9.25□□□□□ -0.93
PDE6C-201ENST00000371447 ZNF491Q8N8L2 437 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 Q8TAT8 98 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 FANCD2OSQ96PS1 177 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 RNF114Q9Y508 228 aa9.25□□□□□ -0.93
PDE6C-201ENST00000371447 EFNA4P52798 201 aa9.24□□□□□ -0.93
PDE6C-201ENST00000371447 TPPP2P59282 170 aa9.24□□□□□ -0.93
PDE6C-201ENST00000371447 NOTCH2Q04721 2471 aa9.24□□□□□ -0.93
PDE6C-201ENST00000371447 HLA-DRB1P01911 266 aa9.24□□□□□ -0.93
PDE6C-201ENST00000371447 MFAP4P55083 255 aa9.24□□□□□ -0.93
PDE6C-201ENST00000371447 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
PDE6C-201ENST00000371447 NAGKQ9UJ70 344 aa9.24□□□□□ -0.93
PDE6C-201ENST00000371447 TBL2Q9Y4P3 447 aaKnown RBP9.24□□□□□ -0.93
PDE6C-201ENST00000371447 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
PDE6C-201ENST00000371447 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
PDE6C-201ENST00000371447 CLEC3BP05452 202 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 FAM106CPP0CH98 169 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 HIST1H1EP10412 219 aaKnown RBP9.23□□□□□ -0.93
PDE6C-201ENST00000371447 RBX1P62877 108 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 C15orf32Q32M92 178 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 CCDC144NLQ6NUI1 221 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 CLEC19AQ6UXS0 136 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
PDE6C-201ENST00000371447 LCNL1Q6ZST4 164 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 ANKRD17O75179 2603 aaKnown RBP9.23□□□□□ -0.93
PDE6C-201ENST00000371447 TRAV40A0A0B4J280 105 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 IZUMO1RA6ND01 250 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 J3KRW8 73 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 M0R1W7 72 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 ATP6V0E1O15342 81 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 TMEM183BQ1AE95 376 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 ZNF562Q6V9R5 426 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 ARL2-SNX15V9GYD0 113 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 IGHV4-39P01824 125 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 C1orf122Q6ZSJ8 110 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 C8orf49Q96NF6 230 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 USP24Q9UPU5 2620 aa9.23□□□□□ -0.93
PDE6C-201ENST00000371447 IGHV7-81A0A0B4J1V7 117 aa9.22□□□□□ -0.93
PDE6C-201ENST00000371447 COA6Q5JTJ3 125 aaKnown RBP9.22□□□□□ -0.93
PDE6C-201ENST00000371447 LCN12Q6JVE5 192 aa9.22□□□□□ -0.93
PDE6C-201ENST00000371447 MCRIP2Q9BUT9 160 aaKnown RBP9.22□□□□□ -0.93
PDE6C-201ENST00000371447 LY96Q9Y6Y9 160 aa9.22□□□□□ -0.93
PDE6C-201ENST00000371447 SMIM27A0A1W2PRY6 76 aa9.22□□□□□ -0.93
PDE6C-201ENST00000371447 RHOGP84095 191 aa9.22□□□□□ -0.93
PDE6C-201ENST00000371447 DTX2Q86UW9 622 aa9.22□□□□□ -0.93
PDE6C-201ENST00000371447 GNB1LQ9BYB4 327 aa9.22□□□□□ -0.93
PDE6C-201ENST00000371447 SERTM2A0A1B0GWG4 89 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 ODF3BA8MYP8 253 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 PDLIM4P50479 330 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 ATP5J2P56134 94 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 GTSF1Q8WW33 167 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 GRAMD2BQ96HH9 432 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 RPP21Q9H633 154 aaKnown RBP9.21□□□□□ -0.93
PDE6C-201ENST00000371447 IGHV4-61A0A0C4DH41 118 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 HSBP1O75506 76 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 BRS3P32247 399 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 RNF182Q8N6D2 247 aa9.21□□□□□ -0.93
PDE6C-201ENST00000371447 ABCA2Q9BZC7 2435 aa9.21□□□□□ -0.94
PDE6C-201ENST00000371447 IGHV2-70DA0A0C4DH43 119 aa9.21□□□□□ -0.94
PDE6C-201ENST00000371447 ZNF785A8K8V0 405 aa9.21□□□□□ -0.94
PDE6C-201ENST00000371447 CHEK1O14757 476 aa9.21□□□□□ -0.94
PDE6C-201ENST00000371447 IGHV3-11P01762 117 aa9.21□□□□□ -0.94
PDE6C-201ENST00000371447 LMO4P61968 165 aa9.21□□□□□ -0.94
PDE6C-201ENST00000371447 Q8N9W7 124 aa9.21□□□□□ -0.94
PDE6C-201ENST00000371447 SHANK2-AS3Q9BTD1 123 aa9.21□□□□□ -0.94
PDE6C-201ENST00000371447 MRPL27Q9P0M9 148 aaKnown RBP9.21□□□□□ -0.94
PDE6C-201ENST00000371447 TRBV19A0A075B6N1 114 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 M0R143 59 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 LINC00614P0C842 121 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 TSKUQ8WUA8 353 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 ZC2HC1AQ96GY0 325 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 SIRPDQ9H106 197 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 PRORYQ9H606 182 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 POLR3KQ9Y2Y1 108 aaPredicted RBP9.2□□□□□ -0.94
PDE6C-201ENST00000371447 HLA-DQA1P01909 254 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 MYCNOSP40205 109 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 Q86TA4 180 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 CCL19Q99731 98 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 AAMDCQ9H7C9 122 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 NRN1Q9NPD7 142 aa9.2□□□□□ -0.94
PDE6C-201ENST00000371447 THYN1Q9P016 225 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms