RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 TMEM183BQ1AE95 376 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 HIST3H2BBQ8N257 126 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 C5orf17Q8NAS9 161 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 TMEM68Q96MH6 324 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 KLF12Q9Y4X4 402 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 C2CD3Q4AC94 2353 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 TRAV41A0A0B4J266 112 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 TCF21O43680 179 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 USF2Q15853 346 aaPredicted RBP13.41□□□□□ -0.26
UBE3D-203ENST00000369747 KLK9Q2XQG4 91 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 IBA57Q5T440 356 aaKnown RBP13.41□□□□□ -0.26
UBE3D-203ENST00000369747 BAGE2Q86Y30 109 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 FBXL7Q9UJT9 491 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 KLK9Q9UKQ9 250 aa13.41□□□□□ -0.26
UBE3D-203ENST00000369747 SMIM6P0DI80 62 aa13.4□□□□□ -0.26
UBE3D-203ENST00000369747 C19orf54Q5BKX5 351 aa13.4□□□□□ -0.26
UBE3D-203ENST00000369747 Q6ZSV7 163 aa13.4□□□□□ -0.26
UBE3D-203ENST00000369747 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
UBE3D-203ENST00000369747 ATG101Q9BSB4 218 aa13.4□□□□□ -0.26
UBE3D-203ENST00000369747 CRIP2P52943 208 aaPredicted RBP13.39□□□□□ -0.27
UBE3D-203ENST00000369747 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 GPR61Q9BZJ8 451 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 OTORQ9NRC9 128 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 RPH3ALQ9UNE2 315 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 TRAPPC1Q9Y5R8 145 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 OR2T8A6NH00 312 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 MRPS12O15235 138 aaKnown RBP13.39□□□□□ -0.27
UBE3D-203ENST00000369747 TCRAP04437 139 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 CTSGP08311 255 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 IGLC2P0DOY2 106 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 FCGR2BP31994 310 aaPredicted RBP13.39□□□□□ -0.27
UBE3D-203ENST00000369747 UBE2G1P62253 170 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 Q8N2B8 174 aa13.39□□□□□ -0.27
UBE3D-203ENST00000369747 PDZD11Q5EBL8 140 aa13.38□□□□□ -0.27
UBE3D-203ENST00000369747 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
UBE3D-203ENST00000369747 VN1R17PQ8TDU5 208 aa13.38□□□□□ -0.27
UBE3D-203ENST00000369747 SGK494Q96LW2 274 aa13.38□□□□□ -0.27
UBE3D-203ENST00000369747 TXN2Q99757 166 aa13.38□□□□□ -0.27
UBE3D-203ENST00000369747 GAR1Q9NY12 217 aaKnown RBP13.38□□□□□ -0.27
UBE3D-203ENST00000369747 TRBV19A0A075B6N1 114 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 S100A9P06702 114 aaKnown RBP13.37□□□□□ -0.27
UBE3D-203ENST00000369747 PPIFP30405 207 aaKnown RBP13.37□□□□□ -0.27
UBE3D-203ENST00000369747 COA6Q5JTJ3 125 aaKnown RBP13.37□□□□□ -0.27
UBE3D-203ENST00000369747 C10orf99Q6UWK7 81 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 FAM231DQ6ZW35 169 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 EXOC3-AS1Q8N2X6 119 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 C17orf77Q96MU5 243 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 CHRDL1Q9BU40 450 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 TRBV9A0A0B4J1U6 114 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 XKRY2A2RUG3 117 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 ADMP35318 185 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 OR4F17Q8NGA8 305 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 FMC1Q96HJ9 113 aa13.37□□□□□ -0.27
UBE3D-203ENST00000369747 SMIM27A0A1W2PRY6 76 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 ZNF705GA8MUZ8 300 aaPredicted RBP13.36□□□□□ -0.27
UBE3D-203ENST00000369747 FRMD6-AS1P0C7T7 363 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 RHOGP84095 191 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 TMEM183AQ8IXX5 376 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 ZNF502Q8TBZ5 544 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 SMIM12Q96EX1 92 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 ZNF414Q96IQ9 312 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 GPR82Q96P67 336 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 MS4A10Q96PG2 267 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 MLST8Q9BVC4 326 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 RNF24Q9Y225 148 aa13.36□□□□□ -0.27
UBE3D-203ENST00000369747 ATRQ13535 2644 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 LTAP01374 205 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 CBLN1P23435 193 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 S100A2P29034 98 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 CFHR3Q02985 330 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 CA1P00915 261 aaPredicted RBP13.35□□□□□ -0.27
UBE3D-203ENST00000369747 SIGLEC15Q6ZMC9 328 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 LCNL1Q6ZST4 164 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 S100A7AQ86SG5 101 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 NUDT10Q8NFP7 164 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 NUDT11Q96G61 164 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 ZNF580Q9UK33 172 aa13.35□□□□□ -0.27
UBE3D-203ENST00000369747 SCGB2A1O75556 95 aa13.34□□□□□ -0.27
UBE3D-203ENST00000369747 TCL1AP56279 114 aa13.34□□□□□ -0.27
UBE3D-203ENST00000369747 PRR27Q6MZM9 219 aa13.34□□□□□ -0.27
UBE3D-203ENST00000369747 PCP4L1A6NKN8 68 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 GATCO43716 136 aaKnown RBP13.33□□□□□ -0.28
UBE3D-203ENST00000369747 GPR183P32249 361 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 LYPD1Q8N2G4 141 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 CMTM2Q8TAZ6 248 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 KLK15Q9H2R5 256 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 IGLV1-40P01703 118 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 IGLV2-11P01706 119 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 FABP4P15090 132 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 OR10D4PQ8NGN7 298 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 TMEM190Q8WZ59 177 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 HIST1H2BLQ99880 126 aa13.33□□□□□ -0.28
UBE3D-203ENST00000369747 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
UBE3D-203ENST00000369747 SPINK4O60575 86 aa13.32□□□□□ -0.28
UBE3D-203ENST00000369747 SLC35B1P78383 322 aa13.32□□□□□ -0.28
UBE3D-203ENST00000369747 GOLT1AQ6ZVE7 132 aa13.32□□□□□ -0.28
UBE3D-203ENST00000369747 Q86TA4 180 aa13.32□□□□□ -0.28
UBE3D-203ENST00000369747 LINC01006Q8NI28 216 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms