RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TMEM147Q9BVK8 224 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 ARL2-SNX15V9GYD0 113 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 FER1L5A0AVI2 2057 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 A0A1B0GV50 99 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 SDCBPO00560 298 aaPredicted RBP4.02□□□□□ -1.77
UBE3D-202ENST00000369746 LMX1BO60663 402 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 RENP00797 406 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 VSIG8P0DPA2 414 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 CBLN1P23435 193 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 OPRK1P41145 380 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 WFDC2Q14508 124 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 CEACAM16Q2WEN9 425 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 Q56UQ5 140 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 SPRNQ5BIV9 151 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 PAPPA-AS1Q5QFB9 102 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 SBSPONQ8IVN8 264 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 OR5C1Q8NGR4 320 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 PRELID3AQ96N28 172 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 WFDC6Q9BQY6 131 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 AAMDCQ9H7C9 122 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 ZNF286AQ9HBT8 521 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 KCNE3Q9Y6H6 103 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 KALRNO60229 2985 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 TMEM14DPA8MWL7 114 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 LINC01619G3V211 115 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 SMKR1H3BMG3 65 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 NCR2O95944 276 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 NAPSAO96009 420 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 SAA4P35542 130 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 PPP1CAP62136 330 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 PRDX1Q06830 199 aaKnown RBP4.02□□□□□ -1.77
UBE3D-202ENST00000369746 NMSQ5H8A3 153 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 TRPT1Q86TN4 253 aaKnown RBP4.02□□□□□ -1.77
UBE3D-202ENST00000369746 PIANPQ8IYJ0 282 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 OR10AC1Q8NH08 325 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 PHLDA1Q8WV24 401 aaPredicted RBP4.02□□□□□ -1.77
UBE3D-202ENST00000369746 PRSS27Q9BQR3 290 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 C20orf78Q9BR46 151 aa4.02□□□□□ -1.77
UBE3D-202ENST00000369746 PHF3Q92576 2039 aaKnown RBP4.02□□□□□ -1.77
UBE3D-202ENST00000369746 MDC1Q14676 2089 aaKnown RBP4.02□□□□□ -1.77
UBE3D-202ENST00000369746 TRBV20-1A0A075B6N2 111 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 TMED7-TICAM2A0A0A6YYA0 188 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 SHISA9B4DS77 424 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 BMPR1BO00238 502 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 HOXA3O43365 443 aaPredicted RBP4.01□□□□□ -1.77
UBE3D-202ENST00000369746 LYPD3O95274 346 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 LGALS1P09382 135 aaKnown RBP4.01□□□□□ -1.77
UBE3D-202ENST00000369746 ZNF688P0C7X2 276 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 DYNLT3P51808 116 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 SUB1P53999 127 aaKnown RBP eCLIP4.01□□□□□ -1.77
UBE3D-202ENST00000369746 ETDBQ3ZM63 59 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 MYOZ3Q8TDC0 251 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 ADAT3Q96EY9 351 aaPredicted RBP4.01□□□□□ -1.77
UBE3D-202ENST00000369746 Q96M85 177 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 IMUPQ9GZP8 106 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 OSTCQ9NRP0 149 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 RNF7Q9UBF6 113 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 PROCRQ9UNN8 238 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 IGHV1-24A0A0C4DH33 117 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 M0R2P5 195 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 CCL22O00626 93 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 TNFSF12O43508 249 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 SNCGO76070 127 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 NDUFB2O95178 105 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 MLANAQ16655 118 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 LCN12Q6JVE5 192 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 TCF23Q7RTU1 214 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 LINC00528Q8N1L1 170 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 TMEM190Q8WZ59 177 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 ZNF256Q9Y2P7 627 aaPredicted RBP4.01□□□□□ -1.77
UBE3D-202ENST00000369746 DNHD1Q96M86 4753 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 F2Z2F3 143 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 J3QQQ9 107 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 DUSP14O95147 198 aaKnown RBP4.01□□□□□ -1.77
UBE3D-202ENST00000369746 APOHP02749 345 aaPredicted RBP4.01□□□□□ -1.77
UBE3D-202ENST00000369746 RBMY1CP0DJD4 496 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 FKBP2P26885 142 aaKnown RBP4.01□□□□□ -1.77
UBE3D-202ENST00000369746 TAS2R45P59539 299 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 FAM120AOSQ5T036 256 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 LINC01590Q5TEZ4 76 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 C1orf140Q5VVS0 124 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 TEN1Q86WV5 123 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 SLC22A24Q8N4F4 322 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 GVQW1Q8N7I0 195 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 WFDC11Q8NEX6 87 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 TMEM255BQ8WV15 326 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 C11orf52Q96A22 123 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 RAB37Q96AX2 223 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 FMC1Q96HJ9 113 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 IMMP1LQ96LU5 166 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 LINC00479Q96M42 142 aa4.01□□□□□ -1.77
UBE3D-202ENST00000369746 GOLGA4Q13439 2230 aaKnown RBP4□□□□□ -1.77
UBE3D-202ENST00000369746 IGHV1-45A0A0A0MS14 117 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 A0A1B0GWB2 263 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 FAM24AA6NFZ4 105 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 CPSF4LA6NMK7 179 aaKnown RBP4□□□□□ -1.77
UBE3D-202ENST00000369746 H3BP45 60 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 UQCRQO14949 82 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 IFI6P09912 130 aa4□□□□□ -1.77
UBE3D-202ENST00000369746 GLI4P10075 376 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms