RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 DAZ1Q9NQZ3 744 aaKnown RBP10.42□□□□□ -0.74
PTPRK-207ENST00000368226 FANCMQ8IYD8 2048 aa10.42□□□□□ -0.74
PTPRK-207ENST00000368226 GBF1Q92538 1859 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 TRAV13-1A0A0B4J241 112 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 TPSG1Q9NRR2 321 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 SLC25A20O43772 301 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 SPINK13Q1W4C9 94 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 S100A7L2Q5SY68 101 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 ATP5L2Q7Z4Y8 100 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 C10orf126Q8N4M7 172 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 C8orf49Q96NF6 230 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 NAA38Q9BRA0 125 aaKnown RBP10.41□□□□□ -0.74
PTPRK-207ENST00000368226 WT1P19544 449 aaPredicted RBP10.41□□□□□ -0.74
PTPRK-207ENST00000368226 RPL36AP83881 106 aaKnown RBP10.41□□□□□ -0.74
PTPRK-207ENST00000368226 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 RPL36ALQ969Q0 106 aaKnown RBP10.41□□□□□ -0.74
PTPRK-207ENST00000368226 CSTL1Q9H114 145 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 GSN-AS1Q9NRJ2 163 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 RNF114Q9Y508 228 aa10.41□□□□□ -0.74
PTPRK-207ENST00000368226 UBE2E1P51965 193 aa10.4□□□□□ -0.74
PTPRK-207ENST00000368226 LINC01551Q86U37 167 aa10.4□□□□□ -0.74
PTPRK-207ENST00000368226 FAM215AQ9Y5M1 114 aa10.4□□□□□ -0.74
PTPRK-207ENST00000368226 ASPHD1Q5U4P2 390 aa10.4□□□□□ -0.74
PTPRK-207ENST00000368226 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-207ENST00000368226 LRRK1Q38SD2 2015 aa10.4□□□□□ -0.74
PTPRK-207ENST00000368226 IGHV2-70DA0A0C4DH43 119 aa10.4□□□□□ -0.74
PTPRK-207ENST00000368226 KIAA1671Q9BY89 1806 aa10.4□□□□□ -0.74
PTPRK-207ENST00000368226 ROS1P08922 2347 aa10.4□□□□□ -0.74
PTPRK-207ENST00000368226 TRBV6-6A0A0A6YYG2 114 aa10.4□□□□□ -0.75
PTPRK-207ENST00000368226 HELZP42694 1942 aaKnown RBP10.39□□□□□ -0.75
PTPRK-207ENST00000368226 TRAV12-2A0A075B6T6 113 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 PPBPP02775 128 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 SPTBN1Q01082 2364 aaKnown RBP10.39□□□□□ -0.75
PTPRK-207ENST00000368226 NDUFS8O00217 210 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 CST9LQ9H4G1 147 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 MYLKQ15746 1914 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 AMN1Q8IY45 258 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 LINC01619G3V211 115 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 MMP23AO75900 390 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 GATD1Q8NB37 220 aa10.39□□□□□ -0.75
PTPRK-207ENST00000368226 CFHR2P36980 270 aa10.38□□□□□ -0.75
PTPRK-207ENST00000368226 C17orf58Q2M2W7 97 aa10.38□□□□□ -0.75
PTPRK-207ENST00000368226 DOCK7Q96N67 2140 aa10.38□□□□□ -0.75
PTPRK-207ENST00000368226 IGFL3Q6UXB1 125 aa10.38□□□□□ -0.75
PTPRK-207ENST00000368226 DTX1Q86Y01 620 aa10.38□□□□□ -0.75
PTPRK-207ENST00000368226 HOXA3O43365 443 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-207ENST00000368226 USF3Q68DE3 2245 aa10.38□□□□□ -0.75
PTPRK-207ENST00000368226 PLXNA4Q9HCM2 1894 aa10.38□□□□□ -0.75
PTPRK-207ENST00000368226 LOXP28300 417 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-207ENST00000368226 PAX4O43316 350 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 CD5P06127 495 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 TSC2P49815 1807 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 hDV102S1A0JD36 115 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 CMC4P56277 68 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-207ENST00000368226 SSBP2P81877 361 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-207ENST00000368226 TEX43Q6ZNM6 134 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 TRAV8-2A0A0B4J237 113 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 F5H768 121 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 CEACAM8P31997 349 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-207ENST00000368226 TRAV9-2A0A087WT02 112 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 A0A096LPF7 62 aa10.37□□□□□ -0.75
PTPRK-207ENST00000368226 MRAPQ8TCY5 172 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 NRGNQ92686 78 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 CHCHD1Q96BP2 118 aaKnown RBP10.36□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE12JA6NER3 117 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE1Q13065 139 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE4Q13068 117 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE5Q13069 117 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 GAGE13Q4V321 117 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 TMEM256Q8N2U0 113 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 SHANK2-AS3Q9BTD1 123 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 IGLV3-9A0A075B6K5 115 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 TMEM158Q8WZ71 300 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 RSPO3Q9BXY4 272 aaPredicted RBP10.36□□□□□ -0.75
PTPRK-207ENST00000368226 PLNP26678 52 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 Q86TA4 180 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 JPT2Q9H910 190 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 TMEM86BQ8N661 226 aa10.36□□□□□ -0.75
PTPRK-207ENST00000368226 ARMS2P0C7Q2 107 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 NBL1P41271 181 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 TCF15Q12870 199 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 PKDREJQ9NTG1 2253 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 TMEM213A2RRL7 107 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 HIST1H2BLQ99880 126 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 SPXQ9BT56 116 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 CADP27708 2225 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 ZNF407Q9C0G0 2248 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 IGHV3-38A0A0C4DH36 116 aa10.35□□□□□ -0.75
PTPRK-207ENST00000368226 PAX9P55771 341 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 SPRNQ5BIV9 151 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 ZNF134P52741 427 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 C6orf226Q5I0X4 101 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 PIP4P1Q86T03 277 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 ZNF625Q96I27 306 aaPredicted RBP10.34□□□□□ -0.75
PTPRK-207ENST00000368226 C1QTNF4Q9BXJ3 329 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 DOPEY2Q9Y3R5 2298 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 M0R2P5 195 aa10.34□□□□□ -0.75
PTPRK-207ENST00000368226 ZNF833PQ6ZTB9 187 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms