RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TBX15Q96SF7 602 aa5.74□□□□□ -1.49
CLCN3-202ENST00000360642 PTPRQQ9UMZ3 2332 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 MALRD1Q5VYJ5 2156 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 A0A1B0GV90 55 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 A0A1W2PS18 150 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 TOMM40O96008 361 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 SLC25A5P05141 298 aaKnown RBP5.73□□□□□ -1.49
CLCN3-202ENST00000360642 COX7A1P24310 79 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 PROK1P58294 105 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 SLAQ13239 276 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 GDF5OSQ5U4N7 250 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 GPR82Q96P67 336 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 RCHY1Q96PM5 261 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 ATG101Q9BSB4 218 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 CHRDL1Q9BU40 450 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 PRSS22Q9GZN4 317 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 LY6HO94772 140 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 LTAP01374 205 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 APCSP02743 223 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 LIPFP07098 398 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 HIST1H1EP10412 219 aaKnown RBP5.73□□□□□ -1.49
CLCN3-202ENST00000360642 PSG1P11464 419 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 SRIP30626 198 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 USF2Q15853 346 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-202ENST00000360642 TDRG1Q3Y452 100 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF600Q6ZNG1 722 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 Q8N976 141 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 OR11H6Q8NGC7 330 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 OR8B3Q8NGG8 313 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 KCNS1Q96KK3 526 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 OR8B2Q96RD0 313 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF331Q9NQX6 463 aaPredicted RBP5.73□□□□□ -1.49
CLCN3-202ENST00000360642 TMEM14CQ9P0S9 112 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 VPS13CQ709C8 3753 aa5.73□□□□□ -1.49
CLCN3-202ENST00000360642 UBE2G1P62253 170 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 LINC00322Q6ZN03 302 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-202ENST00000360642 C5orf17Q8NAS9 161 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 FMC1Q96HJ9 113 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 SGK494Q96LW2 274 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 MRPL27Q9P0M9 148 aaKnown RBP5.72□□□□□ -1.49
CLCN3-202ENST00000360642 HIGD1AQ9Y241 93 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 CELSR1Q9NYQ6 3014 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 A0A1B0GXF2 115 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 C19orf71A6NCJ1 209 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF705FA8MVS1 300 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF253O75346 499 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 IGKV1-17P01599 117 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 TCRAP04437 139 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF705DP0CH99 300 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF705BP0CI00 300 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-202ENST00000360642 LEMD1Q68G75 181 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 SIGLECL1Q8N7X8 197 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 NPBQ8NG41 125 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 LINC00476Q8WZB0 136 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 C20orf144Q9BQM9 153 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 SAMD10Q9BYL1 202 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 SLC25A39Q9BZJ4 359 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-202ENST00000360642 Q9H3A6 140 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 HIGD1CA8MV81 97 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 K7EIM0 57 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 CCL21O00585 134 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 OR2J3O76001 311 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 TOMM20LQ6UXN7 152 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 ATP5L2Q7Z4Y8 100 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 C18orf32Q8TCD1 76 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF586Q9NXT0 402 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF492Q9P255 531 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 ONECUT1Q9UBC0 465 aa5.72□□□□□ -1.49
CLCN3-202ENST00000360642 TBL2Q9Y4P3 447 aaKnown RBP5.72□□□□□ -1.49
CLCN3-202ENST00000360642 H3BTX0 84 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 ZNF324O75467 553 aaPredicted RBP5.71□□□□□ -1.49
CLCN3-202ENST00000360642 NDUFA3O95167 84 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 HTR1DP28221 377 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 KLF5Q13887 457 aaPredicted RBP5.71□□□□□ -1.49
CLCN3-202ENST00000360642 C11orf71Q6IPW1 123 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 PRR27Q6MZM9 219 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 RAB1BQ9H0U4 201 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 CSTL1Q9H114 145 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 NRN1Q9NPD7 142 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 OTORQ9NRC9 128 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 DPM3Q9P2X0 92 aa5.71□□□□□ -1.49
CLCN3-202ENST00000360642 CHD8Q9HCK8 2581 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 ODF3BA8MYP8 253 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 IGLV2-11P01706 119 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 LYZP61626 148 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 NIT1Q86X76 327 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 VN1R17PQ8TDU5 208 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 RBM14Q96PK6 669 aaKnown RBP5.71□□□□□ -1.5
CLCN3-202ENST00000360642 RASL11BQ9BPW5 248 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 SNHG12Q9BXW3 62 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 CBLN4Q9NTU7 201 aa5.71□□□□□ -1.5
CLCN3-202ENST00000360642 TRBV6-1A0A0K0K1D8 114 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 M0R1W7 72 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 NBR2O15453 112 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 NDUFB8O95169 186 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 RAB4AP20338 218 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 MMDQ15546 238 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 GTSF1Q8WW33 167 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 FAM103A1Q9BTL3 118 aaKnown RBP5.7□□□□□ -1.5
CLCN3-202ENST00000360642 RPP21Q9H633 154 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms