RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ZNF138P52744 262 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 FDCSPQ8NFU4 85 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 E9PLN8 166 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 THBDP07204 575 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 CDKN1BP46527 198 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 DEFB104AQ8WTQ1 72 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 IGKV1D-13A0A0B4J2D9 117 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 IGKV1-13P0DP09 117 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 APOC4P55056 127 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 LINC01560Q8TB33 94 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 CYTL1Q9NRR1 136 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 IGFBP3P17936 291 aaPredicted RBP10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 LYZL1Q6UWQ5 148 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 ADAMTSL1Q8N6G6 1762 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 TRAV41A0A0B4J266 112 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 TCRAP04437 139 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 TIMM21Q9BVV7 248 aa10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 REPIN1Q9BWE0 567 aaKnown RBP10.91□□□□□ -0.66
SRGAP3-201ENST00000360413 A0A1B0GWJ7 208 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 A0A1W2PPM0 123 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 SAA2-SAA4A0A096LPE2 208 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 PATE3B3GLJ2 98 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 MMP23AO75900 390 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 SAA2P0DJI9 122 aaPredicted RBP10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 EGR2P11161 476 aaPredicted RBP10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 LY6G5BQ8NDX9 201 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 IGHV3OR16-10A0A075B7F0 116 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 TRBV6-7A0A0A0MS04 114 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 SMIM20Q8N5G0 67 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 ZSWIM8A7E2V4 1837 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 IL18BPO95998 194 aa10.9□□□□□ -0.66
SRGAP3-201ENST00000360413 DSCAML1Q8TD84 2053 aa10.9□□□□□ -0.67
SRGAP3-201ENST00000360413 B4DSR2 109 aa10.9□□□□□ -0.67
SRGAP3-201ENST00000360413 PDE6HQ13956 83 aa10.9□□□□□ -0.67
SRGAP3-201ENST00000360413 DEFB121Q5J5C9 76 aa10.9□□□□□ -0.67
SRGAP3-201ENST00000360413 C3orf56Q8N813 242 aa10.9□□□□□ -0.67
SRGAP3-201ENST00000360413 IGKV2-40A0A087WW87 121 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 IGKV2D-40P01614 121 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 SLC22A18ASQ8N1D0 253 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 DENND4CQ5VZ89 1909 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 PRB3Q04118 309 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 CEP192Q8TEP8 1941 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 M0R1W7 72 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 ID3Q02535 119 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 ZNF474Q6S9Z5 364 aaPredicted RBP10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 EXOC3-AS1Q8N2X6 119 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 IMMP1LQ96LU5 166 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 TRGV9Q99603 122 aa10.89□□□□□ -0.67
SRGAP3-201ENST00000360413 LHBP01229 141 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 ADCYAP1P18509 176 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 UTF1Q5T230 341 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 THAP8Q8NA92 274 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 TCTEX1D4Q5JR98 221 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 NLRC5Q86WI3 1866 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 SLC25A45Q8N413 288 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 TRAV40A0A0B4J280 105 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 PRIMA1Q86XR5 153 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 CCL3L1P16619 93 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 C15orf32Q32M92 178 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 PRSS57Q6UWY2 283 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 FBLN5Q9UBX5 448 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 RFNGQ9Y644 331 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 MRPL14Q6P1L8 145 aaKnown RBP10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 SPXQ9BT56 116 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 CSTL1Q9H114 145 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 TREML4Q6UXN2 200 aa10.88□□□□□ -0.67
SRGAP3-201ENST00000360413 MORN5Q5VZ52 161 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 ANKRD29Q8N6D5 301 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 KLHDC3Q9BQ90 382 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 MORN2Q502X0 79 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 CDCP2Q5VXM1 449 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 PPP1R32Q7Z5V6 425 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 BRWD3Q6RI45 1802 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 SMKR1H3BMG3 65 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 H3BMG7 143 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 CTHRC1Q96CG8 243 aa10.87□□□□□ -0.67
SRGAP3-201ENST00000360413 IGHV3-73A0A0B4J1V6 119 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 POU2AF1Q16633 256 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 CRLF1O75462 422 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 IGHG3P01860 377 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 ZNF876PQ49A33 203 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 SPATA31B1PQ5VZV4 182 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 LY96Q9Y6Y9 160 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 PMS2P5A8MQ11 134 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 Q0VG73 95 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 TET2Q6N021 2002 aaPredicted RBP10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 SRRM4A7MD48 611 aaKnown RBP10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 ZMAT4Q9H898 229 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 A0A1B0GUS0 222 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 TEX48A0A1B0GUV7 120 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 FGF6P10767 208 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 TRBV25-1A0A075B6N4 114 aa10.86□□□□□ -0.67
SRGAP3-201ENST00000360413 HAMPP81172 84 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms