RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TMEM200BQ69YZ2 307 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 NDUFB8O95169 186 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 ID3Q02535 119 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 TPTE2P1Q5T6R2 138 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 MRPL27Q9P0M9 148 aaKnown RBP7.95□□□□□ -1.14
CUX1-203ENST00000360264 IGHV3OR16-8A0A075B7F1 116 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 MEGF9Q9H1U4 602 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 H3BUX3 64 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 PYYP10082 97 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 C1QL4Q86Z23 238 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 SIP14410 1827 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 SRRM5B3KS81 715 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 MUC21A0A0G2JKD1 596 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 MUC21A0A140T8X8 626 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 NPIPB5A8MRT5 1133 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 PRTN3P24158 256 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 UNQ6494/PRO21346Q6UXR6 183 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 MRPL52Q86TS9 123 aaKnown RBP7.95□□□□□ -1.14
CUX1-203ENST00000360264 FNDC4Q9H6D8 234 aaPredicted RBP7.95□□□□□ -1.14
CUX1-203ENST00000360264 EVI2AP22794 236 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 Q5BKY6 102 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 C6orf226Q5I0X4 101 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 SFTA2Q6UW10 78 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 HIST1H4AP62805 103 aaKnown RBP7.94□□□□□ -1.14
CUX1-203ENST00000360264 TCRAP04437 139 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 CSTL1Q9H114 145 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 NKAPP1Q8N9T2 125 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 ZNF837Q96EG3 531 aaPredicted RBP7.94□□□□□ -1.14
CUX1-203ENST00000360264 TMEM141Q96I45 108 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 ZNF876PQ49A33 203 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 TRBV6-6A0A0A6YYG2 114 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 C2orf82Q6UX34 121 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 NMSQ5H8A3 153 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 TRBV25-1A0A075B6N4 114 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 CD55P08174 381 aa7.94□□□□□ -1.14
CUX1-203ENST00000360264 IGKV1D-43A0A0B4J1Z2 117 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 TRPT1Q86TN4 253 aaKnown RBP7.93□□□□□ -1.14
CUX1-203ENST00000360264 F8VVB4 439 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 F8VWA3 439 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 MSMBP08118 114 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 TMEM219Q86XT9 240 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 TMEM126AQ9H061 195 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 CRYGSP22914 178 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 CRIM1Q9NZV1 1036 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 BUB1B-PAK6H3BSN5 160 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 CSRP3P50461 194 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 BOD1L2Q8IYS8 172 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 C14orf178Q8N769 122 aaPredicted RBP7.93□□□□□ -1.14
CUX1-203ENST00000360264 ANKRD17O75179 2603 aaKnown RBP7.93□□□□□ -1.14
CUX1-203ENST00000360264 ZNF561-AS1K7EIQ3 104 aa7.93□□□□□ -1.14
CUX1-203ENST00000360264 IGHV3-73A0A0B4J1V6 119 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 TRAV13-2A0A0B4J235 113 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 FCN3O75636 299 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 THAP8Q8NA92 274 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 CEP295Q9C0D2 2601 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 IGKV1-9A0A0C4DH69 117 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 J3QLI3 93 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 C1orf159Q96HA4 380 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 RNF222A6NCQ9 220 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 SIGLEC9Q9Y336 463 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 H0YJW9 148 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 RPL15P61313 204 aaKnown RBP7.92□□□□□ -1.14
CUX1-203ENST00000360264 BCL6BQ8N143 479 aaPredicted RBP7.92□□□□□ -1.14
CUX1-203ENST00000360264 ZNF48Q96MX3 618 aaPredicted RBP7.92□□□□□ -1.14
CUX1-203ENST00000360264 NEUROG3Q9Y4Z2 214 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 IGKV1D-13A0A0B4J2D9 117 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 IGKV1-13P0DP09 117 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 PSG3Q16557 428 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 SOCS3O14543 225 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 GAFA1Q96PS6 74 aa7.92□□□□□ -1.14
CUX1-203ENST00000360264 SLAQ13239 276 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 Q5PR19 223 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 GFI1BQ5VTD9 330 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 SIPA1L1O43166 1804 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 F5H768 121 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 FAM231BA6NCW3 169 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 LY6DQ14210 128 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 LYZL1Q6UWQ5 148 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 PRIMA1Q86XR5 153 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 TRAV5A0A0B4J249 113 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 DAD1P61803 113 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 NEGR1Q7Z3B1 354 aa7.91□□□□□ -1.14
CUX1-203ENST00000360264 LSM4Q9Y4Z0 139 aaKnown RBP7.91□□□□□ -1.14
CUX1-203ENST00000360264 PSPNO60542 156 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 GUSBP1Q15486 140 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 FAM110DQ8TAY7 271 aaPredicted RBP7.9□□□□□ -1.14
CUX1-203ENST00000360264 MBD3L4A6NDZ8 208 aaPredicted RBP7.9□□□□□ -1.14
CUX1-203ENST00000360264 MBD3L3A6NE82 208 aaPredicted RBP7.9□□□□□ -1.14
CUX1-203ENST00000360264 MBD3L5A6NJ08 208 aaPredicted RBP7.9□□□□□ -1.14
CUX1-203ENST00000360264 MBD3L2Q8NHZ7 208 aaPredicted RBP7.9□□□□□ -1.14
CUX1-203ENST00000360264 IGKV2-40A0A087WW87 121 aaPredicted RBP7.9□□□□□ -1.14
CUX1-203ENST00000360264 IGKV2D-40P01614 121 aaPredicted RBP7.9□□□□□ -1.14
CUX1-203ENST00000360264 GNLYP22749 145 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 IGHV3-64A0A075B6Q5 118 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 A0A0U1RRA0 63 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 GATA4P43694 442 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 TRAV8-1A0A0A6YYK1 113 aa7.9□□□□□ -1.14
CUX1-203ENST00000360264 UBE2CO00762 179 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms