RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 C17orf100A8MU93 164 aa14.32□□□□□ -0.12
CACNA1A-201ENST00000360228 SYS1-DBNDD2H3BUS1 97 aa14.32□□□□□ -0.12
CACNA1A-201ENST00000360228 CEACAM1P13688 526 aa14.32□□□□□ -0.12
CACNA1A-201ENST00000360228 LYZL1Q6UWQ5 148 aa14.32□□□□□ -0.12
CACNA1A-201ENST00000360228 UBE2E2Q96LR5 201 aa14.32□□□□□ -0.12
CACNA1A-201ENST00000360228 CLPSP04118 112 aa14.32□□□□□ -0.12
CACNA1A-201ENST00000360228 LINC00527Q9UJ94 153 aa14.32□□□□□ -0.12
CACNA1A-201ENST00000360228 TEX38Q6PEX7 206 aa14.31□□□□□ -0.12
CACNA1A-201ENST00000360228 SLC25A45Q8N413 288 aa14.31□□□□□ -0.12
CACNA1A-201ENST00000360228 SEC61GP60059 68 aa14.31□□□□□ -0.12
CACNA1A-201ENST00000360228 MBNL3Q9NUK0 354 aaKnown RBP14.31□□□□□ -0.12
CACNA1A-201ENST00000360228 J3QW42 95 aa14.31□□□□□ -0.12
CACNA1A-201ENST00000360228 ITGBL1O95965 494 aaPredicted RBP14.31□□□□□ -0.12
CACNA1A-201ENST00000360228 NUP35Q8NFH5 326 aa14.3□□□□□ -0.12
CACNA1A-201ENST00000360228 C9orf118A6NHY6 69 aa14.3□□□□□ -0.12
CACNA1A-201ENST00000360228 LCN12Q6JVE5 192 aa14.3□□□□□ -0.12
CACNA1A-201ENST00000360228 DEFB130BP0DP73 79 aa14.3□□□□□ -0.12
CACNA1A-201ENST00000360228 DEFB130AP0DP74 79 aa14.3□□□□□ -0.12
CACNA1A-201ENST00000360228 SLAQ13239 276 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 IGHG2P01859 326 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 RFPL3SP0C7P2 107 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 PFN2P35080 140 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 PSG7Q13046 419 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 SIGLEC12Q96PQ1 595 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 PTPRBP23467 1997 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 KLRD1Q13241 179 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 BRK1Q8WUW1 75 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 KNCNA6PVL3 124 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 PRB2P02812 416 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 SMKR1H3BMG3 65 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 IGHV1-2P23083 117 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 MORN5Q5VZ52 161 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 TRBV7-1A0A0A6YYK4 115 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 B5MCH6 92 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 EREGO14944 169 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 ZNF138P52744 262 aa14.29□□□□□ -0.12
CACNA1A-201ENST00000360228 TIMM23O14925 209 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 SH2D1AO60880 128 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 K7EP13 123 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 C1QTNF4Q9BXJ3 329 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 WFDC9Q8NEX5 89 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 PPP1R32Q7Z5V6 425 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 C1QTNF5Q9BXJ0 243 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 CELA3AP09093 270 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 SYNJ2BPP57105 145 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 KLHL30-AS1Q8NEE0 82 aa14.28□□□□□ -0.12
CACNA1A-201ENST00000360228 TRAV1-1A0A0B4J248 108 aa14.27□□□□□ -0.13
CACNA1A-201ENST00000360228 PRCDQ00LT1 54 aa14.27□□□□□ -0.13
CACNA1A-201ENST00000360228 MDS2Q8NDY4 140 aa14.27□□□□□ -0.13
CACNA1A-201ENST00000360228 FOXG1P55316 489 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-201ENST00000360228 Q8TAT8 98 aa14.27□□□□□ -0.13
CACNA1A-201ENST00000360228 MRPL27Q9P0M9 148 aaKnown RBP14.27□□□□□ -0.13
CACNA1A-201ENST00000360228 PCNX3Q9H6A9 2034 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 CRLF1O75462 422 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 VMO1Q7Z5L0 202 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 LY6G5BQ8NDX9 201 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 KLHDC3Q9BQ90 382 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 TMEM243Q9BU79 118 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 CXCL1P09341 107 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 CFHR3Q02985 330 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 BMPERQ8N8U9 685 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 SCRT2Q9NQ03 307 aa14.26□□□□□ -0.13
CACNA1A-201ENST00000360228 NDUFS6O75380 124 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-201ENST00000360228 TFF1P04155 84 aa14.25□□□□□ -0.13
CACNA1A-201ENST00000360228 SMIM20Q8N5G0 67 aa14.25□□□□□ -0.13
CACNA1A-201ENST00000360228 RNF126Q9BV68 326 aa14.25□□□□□ -0.13
CACNA1A-201ENST00000360228 ZNF106Q9H2Y7 1883 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-201ENST00000360228 SAP25Q8TEE9 199 aa14.25□□□□□ -0.13
CACNA1A-201ENST00000360228 C22orf46C9J442 243 aa14.25□□□□□ -0.13
CACNA1A-201ENST00000360228 THBDP07204 575 aa14.25□□□□□ -0.13
CACNA1A-201ENST00000360228 LINC01590Q5TEZ4 76 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 MCRIP2Q9BUT9 160 aaKnown RBP14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 LINC00477Q96M19 166 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 FAM231BA6NCW3 169 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 AMN1Q8IY45 258 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 CEP192Q8TEP8 1941 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 RNF222A6NCQ9 220 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 SHISA9B4DS77 424 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 F5H768 121 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 TIAF1O95411 115 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 C8orf31Q8N9H6 132 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 CTSBP07858 339 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 CRYBA4P53673 196 aa14.24□□□□□ -0.13
CACNA1A-201ENST00000360228 TAL2Q16559 108 aa14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 IGKV1D-13A0A0B4J2D9 117 aa14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 IGKV1-13P0DP09 117 aa14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 FGF6P10767 208 aa14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 TRBV6-7A0A0A0MS04 114 aa14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 ZCCHC24Q8N2G6 241 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 DEFB105AQ8NG35 78 aa14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 RNASE6Q93091 150 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 CHCHD2Q9Y6H1 151 aaPredicted RBP14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 LIME1Q9H400 295 aa14.23□□□□□ -0.13
CACNA1A-201ENST00000360228 ATOX1O00244 68 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 ZC2HC1BQ5TFG8 222 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 A8MWP6 167 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 LYNX1G3V0Z9 82 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 LYNX1P0DP58 116 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 GAS1P54826 345 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 CCDC168Q8NDH2 2452 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms