RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 C3orf56Q8N813 242 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 OR13C6PQ8NH95 151 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 MRPL16Q9NX20 251 aaKnown RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 MUC6Q6W4X9 2439 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 MALRD1Q5VYJ5 2156 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 MED13Q9UHV7 2174 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 LHBP01229 141 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 Q6ZRM9 215 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 NCOA6Q14686 2063 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 SHISA9B4DS77 424 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 SLC25A20O43772 301 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 LY6HO94772 140 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 IGHV2-70P01814 119 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 IGHV2-5P01817 119 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 ELANEP08246 267 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 PLNP26678 52 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 ZNF329Q86UD4 541 aa3.92□□□□□ -1.78
SCN3A-202ENST00000360093 MRPL27Q9P0M9 148 aaKnown RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 CHTOPQ9Y3Y2 248 aaKnown RBP3.92□□□□□ -1.78
SCN3A-202ENST00000360093 SRSF3P84103 164 aaKnown RBP3.91□□□□□ -1.78
SCN3A-202ENST00000360093 MORN3Q6PF18 240 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-202ENST00000360093 A0A0G2JRQ6 117 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 RHODO00212 210 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 NDUFA3O95167 84 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 IGKCP01834 107 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 KLF17Q5JT82 389 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-202ENST00000360093 ACTL10Q5JWF8 245 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 SPRY4Q9C004 299 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 ZNF503-AS2A6NEH8 195 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 SH2D1AO60880 128 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 FCN3O75636 299 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HTN3P15516 51 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM86BQ8N661 226 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 SPOCK3Q9BQ16 436 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 UBE2CO00762 179 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BKO60814 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BJP06899 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 CD28P10747 220 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BOP23527 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BBP33778 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BDP58876 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BCP62807 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST2H2BEQ16778 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-202ENST00000360093 ATOH7Q8N100 152 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BHQ93079 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BNQ99877 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 HIST1H2BMQ99879 126 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 REG4Q9BYZ8 158 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 DKK4Q9UBT3 224 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 TRAV9-2A0A087WT02 112 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 MUC21A0A0G2JKD1 596 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 MUC21A0A140T8X8 626 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 C11orf44Q8N8P7 122 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 OR11H6Q8NGC7 330 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 ZNF581Q9P0T4 197 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 ZNF492Q9P255 531 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 CR1LQ2VPA4 569 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 FAM90A2PQ658T7 463 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 FAM19A2Q8N3H0 131 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 ZNF524Q96C55 264 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 SCGB1A1P11684 91 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 NUP35Q8NFH5 326 aa3.91□□□□□ -1.78
SCN3A-202ENST00000360093 SSBP4Q9BWG4 385 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-202ENST00000360093 DAZAP2Q15038 168 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-202ENST00000360093 FBXL19-AS1Q494R0 122 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 THAP8Q8NA92 274 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 CHCHD5Q9BSY4 110 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 CACNA1GO43497 2377 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 FREM1Q5H8C1 2179 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 SHANK1Q9Y566 2161 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 A0A087WX48 190 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 TRAV12-3A0A0B4J271 114 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 APOC4P55056 127 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 NDPQ00604 133 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 LYZL1Q6UWQ5 148 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 TOMM7Q9P0U1 55 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 IL17RELQ6ZVW7 336 aa3.9□□□□□ -1.78
SCN3A-202ENST00000360093 DYSFO75923 2080 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 PGPEP1LA6NFU8 196 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 MTURNQ8N3F0 131 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 HS3ST6Q96QI5 342 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 TRGV1A0A0A0MS02 117 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 TRBV7-9A0A0J9YWB2 115 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 OVOL3O00110 214 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 SYNJ2BPP57105 145 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 RUSC1-AS1Q66K80 236 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 LHFPL4Q7Z7J7 247 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 Q86TA4 180 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 RSPO3Q9BXY4 272 aaPredicted RBP3.9□□□□□ -1.79
SCN3A-202ENST00000360093 D6R8Y8 96 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 TYMSP04818 313 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 CTAG1AP78358 180 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 OR5A1Q8NGJ0 315 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 PLEKHB2Q96CS7 222 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 MED12LQ86YW9 2145 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 DEFB113Q30KQ7 82 aa3.9□□□□□ -1.79
SCN3A-202ENST00000360093 A8MWV9 139 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 TMEM238C9JI98 176 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms