RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CENPVL3A0A0U1RRI6 287 aa10.01□□□□□ -0.81
GGPS1-202ENST00000358966 A0A1W2PPV4 95 aa10.01□□□□□ -0.81
GGPS1-202ENST00000358966 PAGE4O60829 102 aa10.01□□□□□ -0.81
GGPS1-202ENST00000358966 LINC00869P0C866 280 aa10.01□□□□□ -0.81
GGPS1-202ENST00000358966 IGLL1P15814 213 aa10.01□□□□□ -0.81
GGPS1-202ENST00000358966 YPEL3P61236 119 aaPredicted RBP10.01□□□□□ -0.81
GGPS1-202ENST00000358966 MIR17HGQ75NE6 70 aa10.01□□□□□ -0.81
GGPS1-202ENST00000358966 CLEC3BP05452 202 aa10□□□□□ -0.81
GGPS1-202ENST00000358966 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
GGPS1-202ENST00000358966 UFSP1Q6NVU6 142 aa10□□□□□ -0.81
GGPS1-202ENST00000358966 TMEM219Q86XT9 240 aa10□□□□□ -0.81
GGPS1-202ENST00000358966 KIR3DL3Q8N743 410 aa10□□□□□ -0.81
GGPS1-202ENST00000358966 HIF1ANQ9NWT6 349 aa10□□□□□ -0.81
GGPS1-202ENST00000358966 UNC79Q9P2D8 2635 aa10□□□□□ -0.81
GGPS1-202ENST00000358966 MPDU1O75352 247 aa10□□□□□ -0.81
GGPS1-202ENST00000358966 MEF2BQ02080 365 aaPredicted RBP10□□□□□ -0.81
GGPS1-202ENST00000358966 NF1P21359 2839 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 VWC2LB2RUY7 222 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 ATP5G3P48201 142 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 PLP1P60201 277 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 PRR20EP86478 221 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 PRR20CP86479 221 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 PRR20DP86480 221 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 PRR20BP86481 221 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 PRR20AP86496 221 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 FXYD3Q14802 87 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 CCDC144NLQ6NUI1 221 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 IGKV1D-37A0A075B6S9 117 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.99□□□□□ -0.81
GGPS1-202ENST00000358966 IFNA1P01562 189 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 UBE2E1P51965 193 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 SGMS2Q8NHU3 365 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 SSBP4Q9BWG4 385 aaPredicted RBP9.99□□□□□ -0.81
GGPS1-202ENST00000358966 MRPL18Q9H0U6 180 aaKnown RBP9.99□□□□□ -0.81
GGPS1-202ENST00000358966 MYO9AB2RTY4 2548 aa9.99□□□□□ -0.81
GGPS1-202ENST00000358966 TRAV9-2A0A087WT02 112 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 TRAV5A0A0B4J249 113 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 AVPP01185 164 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 OR4F5Q8NH21 305 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 GNB4Q9HAV0 340 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 FAM231BA6NCW3 169 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 NPFFO15130 113 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 CD5LO43866 347 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 CX3CL1P78423 397 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 HSD52Q0P140 79 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 Q0VG73 95 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 LINC01548A6NM66 108 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 TSPAN13O95857 204 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 GATA3P23771 443 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 TCTEX1D4Q5JR98 221 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 GTF2H5Q6ZYL4 71 aa9.98□□□□□ -0.81
GGPS1-202ENST00000358966 NDUFA3O95167 84 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 IGHV3-23P01764 117 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 FOXL1Q12952 345 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 ASPHD1Q5U4P2 390 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
GGPS1-202ENST00000358966 A0A1W2PS18 150 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 INS-IGF2F8WCM5 200 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 PRB4P10163 310 aaPredicted RBP9.97□□□□□ -0.81
GGPS1-202ENST00000358966 SUB1P53999 127 aaKnown RBP eCLIP9.97□□□□□ -0.811e-6■■■■■ 30.7
GGPS1-202ENST00000358966 RPL24P83731 157 aaKnown RBP9.97□□□□□ -0.81
GGPS1-202ENST00000358966 PAX8Q06710 450 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 PMCHL1Q16048 86 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 FAM19A2Q8N3H0 131 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 MRAP2Q96G30 205 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 RCHY1Q96PM5 261 aa9.97□□□□□ -0.81
GGPS1-202ENST00000358966 TMEM250H0YL14 139 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 STAG3L2P0CL84 134 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 NPPCP23582 126 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 TMEM249Q2WGJ8 235 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 MINOS1Q5TGZ0 78 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 Q8N6K4 173 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 NPBQ8NG41 125 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 C7orf69Q9H7B7 122 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 YTHDF2Q9Y5A9 579 aaKnown RBP9.96□□□□□ -0.81
GGPS1-202ENST00000358966 TSSC4Q9Y5U2 329 aaPredicted RBP9.96□□□□□ -0.81
GGPS1-202ENST00000358966 MINOS1-NBL1R4GNA1 71 aa9.96□□□□□ -0.81
GGPS1-202ENST00000358966 MTORP42345 2549 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 SETD2Q9BYW2 2564 aaPredicted RBP9.96□□□□□ -0.82
GGPS1-202ENST00000358966 PDZD2O15018 2839 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 A0A1B0GW15 77 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 C7orf71A4D174 169 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 GAGE12HA6NDE8 117 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 C11orf94C9JXX5 98 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 BLNKQ8WV28 456 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 ZNF503Q96F45 646 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 LINC00527Q9UJ94 153 aa9.96□□□□□ -0.82
GGPS1-202ENST00000358966 TRBV7-9A0A0J9YWB2 115 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 PGPEP1LA6NFU8 196 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 ORM2P19652 201 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 PSMB3P49720 205 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 Q56UQ5 140 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 C12orf54Q6X4T0 127 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 Q8N9W7 124 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 BORCS7Q96B45 105 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 KCNS1Q96KK3 526 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 TEX48A0A1B0GUV7 120 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 MDFIC2A0A1B0GVS7 189 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 PDE6DO43924 150 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms