RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 C18orf32Q8TCD1 76 aa11.11□□□□□ -0.63
VCP-201ENST00000358901 TICRRQ7Z2Z1 1910 aa11.11□□□□□ -0.63
VCP-201ENST00000358901 GGTLC3B5MD39 225 aa11.11□□□□□ -0.63
VCP-201ENST00000358901 ARMS2P0C7Q2 107 aa11.11□□□□□ -0.63
VCP-201ENST00000358901 LY6DQ14210 128 aa11.11□□□□□ -0.63
VCP-201ENST00000358901 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
VCP-201ENST00000358901 SNHG12Q9BXW3 62 aa11.11□□□□□ -0.63
VCP-201ENST00000358901 CHTOPQ9Y3Y2 248 aaKnown RBP11.11□□□□□ -0.63
VCP-201ENST00000358901 IGKV3D-20A0A0C4DH25 116 aa11.1□□□□□ -0.63
VCP-201ENST00000358901 TDGF1P3P51864 188 aa11.1□□□□□ -0.63
VCP-201ENST00000358901 Q86TA4 180 aa11.1□□□□□ -0.63
VCP-201ENST00000358901 SAMD5Q5TGI4 173 aa11.1□□□□□ -0.63
VCP-201ENST00000358901 TMEM262E9PQX1 116 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 ZNF134P52741 427 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 LURAP1LQ8IV03 231 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 A0A1B0GV72 72 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 NDUFA4L2Q9NRX3 87 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 OVOL1O14753 267 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 LAGE3Q14657 143 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 LYPD1Q8N2G4 141 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 OR5A1Q8NGJ0 315 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 ZC2HC1BQ5TFG8 222 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 LYPD6Q86Y78 171 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 TEX29Q8N6K0 151 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 LYPD6BQ8NI32 183 aa11.09□□□□□ -0.63
VCP-201ENST00000358901 E7EQL1 145 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 SMAD7O15105 426 aaKnown RBP11.08□□□□□ -0.64
VCP-201ENST00000358901 MMP23AO75900 390 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 OOSP1A8MZH6 123 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 HOXA3O43365 443 aaPredicted RBP11.08□□□□□ -0.64
VCP-201ENST00000358901 C17orf58Q2M2W7 97 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 SMPXQ9UHP9 88 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 C2CD3Q4AC94 2353 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 SRRM4A7MD48 611 aaKnown RBP11.08□□□□□ -0.64
VCP-201ENST00000358901 H3BRM9 83 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 YPEL3P61236 119 aaPredicted RBP11.08□□□□□ -0.64
VCP-201ENST00000358901 MINOS1Q5TGZ0 78 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 BRD3OSQ6XYD6 125 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 MINOS1-NBL1R4GNA1 71 aa11.08□□□□□ -0.64
VCP-201ENST00000358901 C15orf65H3BRN8 121 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 Q8NFD4 153 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 SHANK2-AS3Q9BTD1 123 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 CNTFRP26992 372 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 Q6ZWC4 215 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 TMEM101Q96IK0 257 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 UBE2V1Q13404 147 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 TMEM155Q4W5P6 130 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 V9GYV3 84 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 A0A1W2PRX2 142 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 EFNA4P52798 201 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 TMEM158Q8WZ71 300 aa11.07□□□□□ -0.64
VCP-201ENST00000358901 TRGV2A0A075B6R0 118 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 SLAQ13239 276 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 STPG4Q8N801 248 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 A0A0U1RRA0 63 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 TNCP24821 2201 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 DUSP14O95147 198 aaKnown RBP11.06□□□□□ -0.64
VCP-201ENST00000358901 GATA4P43694 442 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 TMEM249Q2WGJ8 235 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 C14orf178Q8N769 122 aaPredicted RBP11.06□□□□□ -0.64
VCP-201ENST00000358901 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
VCP-201ENST00000358901 TMEM8BA6NDV4 472 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 SSC4DQ8WTU2 575 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 TMEM213A2RRL7 107 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 H3BUX3 64 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 PRTN3P24158 256 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 C9orf139Q6ZV77 190 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 MTURNQ8N3F0 131 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 CFHR2P36980 270 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 M0R1W7 72 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 PF4P02776 101 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 C11orf44Q8N8P7 122 aa11.05□□□□□ -0.64
VCP-201ENST00000358901 FGF23Q9GZV9 251 aaPredicted RBP11.05□□□□□ -0.64
VCP-201ENST00000358901 CD28P10747 220 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 TSPAN13O95857 204 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 IGLC2P0DOY2 106 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 IGLC3P0DOY3 106 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 ZNF562Q6V9R5 426 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 ERCC8Q13216 396 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 RNF182Q8N6D2 247 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 MRPS16Q9Y3D3 137 aaKnown RBP11.04□□□□□ -0.64
VCP-201ENST00000358901 TANC1Q9C0D5 1861 aa11.04□□□□□ -0.64
VCP-201ENST00000358901 PLNP26678 52 aa11.03□□□□□ -0.64
VCP-201ENST00000358901 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
VCP-201ENST00000358901 IGHV4-39P01824 125 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 249.7 ms