RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 LINC01560Q8TB33 94 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 FAM215AQ9Y5M1 114 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 TNRC6BQ9UPQ9 1833 aaKnown RBP5.25□□□□□ -1.57
CSDE1-203ENST00000358528 ASPMQ8IZT6 3477 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 IGKV1D-37A0A075B6S9 117 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 K7EM74 188 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 ZNF207O43670 478 aaKnown RBP5.25□□□□□ -1.57
CSDE1-203ENST00000358528 OCIAD2Q56VL3 154 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 S100A7AQ86SG5 101 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 MBD6Q96DN6 1003 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 RNF125Q96EQ8 232 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 SIGLEC9Q9Y336 463 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 SOX21Q9Y651 276 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-203ENST00000358528 IGLV3-9A0A075B6K5 115 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 TRAV8-6A0A0B4J262 113 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 FAM231BA6NCW3 169 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 TIMM23O14925 209 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 PLP1P60201 277 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 ECSCRQ19T08 205 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 ORMDL3Q8N138 153 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 TRGV9Q99603 122 aa5.25□□□□□ -1.57
CSDE1-203ENST00000358528 DSCAML1Q8TD84 2053 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 IGHV2-70DA0A0C4DH43 119 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 SCGB2A1O75556 95 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 CD3EP07766 207 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 KLF5Q13887 457 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-203ENST00000358528 ASCL5Q7RTU5 278 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 OR4A5Q8NH83 315 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 WIPF2Q8TF74 440 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-203ENST00000358528 DEFB104AQ8WTQ1 72 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM160Q9NX00 188 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 CTSZQ9UBR2 303 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 IGHV1-3A0A0C4DH29 117 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 TAX1BP3O14907 124 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 FAM106CPP0CH98 169 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM30BQ3MIR4 351 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 FAM106AQ4KMX7 169 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 RNASE6Q93091 150 aaKnown RBP5.24□□□□□ -1.57
CSDE1-203ENST00000358528 SPCS1Q9Y6A9 102 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 ATRXP46100 2492 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 LOC105371242A0A075B767 164 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 SAP30O75446 220 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 LOXP28300 417 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-203ENST00000358528 GATA4P43694 442 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 KLRD1Q13241 179 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 CR1LQ2VPA4 569 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 FAM120AOSQ5T036 256 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM75Q8N9X5 138 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 IFI27L1Q96BM0 104 aa5.24□□□□□ -1.57
CSDE1-203ENST00000358528 K7EMI3 77 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 MUC3AQ02505 3323 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 LTAP01374 205 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 CLEC3BP05452 202 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 FABP2P12104 132 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 LOXL1Q08397 574 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-203ENST00000358528 ANKRD39Q53RE8 183 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 SFTA2Q6UW10 78 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 FOXC2Q99958 501 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 TTTY13Q9BZ97 58 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 RABAC1Q9UI14 185 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 A0A0G2JNJ9 132 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 CD5LO43866 347 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 GP9P14770 177 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 LEPP41159 167 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 MFAP4P55083 255 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 RBX1P62877 108 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 KIR3DS1Q14943 382 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 THAP8Q8NA92 274 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 FER1L6-AS1Q8NA97 138 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 PRSS33Q8NF86 280 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 OR2K2Q8NGT1 345 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 MAP1LC3AQ9H492 121 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 Q9UFV3 132 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 ANKRD11Q6UB99 2663 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-203ENST00000358528 A0A0G2JLM5 398 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 SH2D1AO60880 128 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 HBDP02042 147 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 GTSCR1Q86UQ5 136 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 TIMD4Q96H15 378 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 URB1-AS1Q96HZ7 61 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 MS4A6AQ9H2W1 248 aa5.23□□□□□ -1.57
CSDE1-203ENST00000358528 NHP2Q9NX24 153 aaKnown RBP5.23□□□□□ -1.57
CSDE1-203ENST00000358528 A0A1B0GXF2 115 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 IGLC1P0CG04 106 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 S100A4P26447 101 aaKnown RBP5.22□□□□□ -1.57
CSDE1-203ENST00000358528 HLA-DMBP28068 263 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 MTURNQ8N3F0 131 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 DEFB125Q8N687 156 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 FAM57AQ8TBR7 257 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 ZNF747Q9BV97 191 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 SIGLEC8Q9NYZ4 499 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 DCHS1Q96JQ0 3298 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 PTPRBP23467 1997 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 PSMB11A5LHX3 300 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 RHOGP84095 191 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 RBPJQ06330 500 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 PSG3Q16557 428 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 PCP2Q8IVA1 136 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 ABHD17AQ96GS6 310 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 COL25A1Q9BXS0 654 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms