RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 IGKV2D-26A0A0A0MRZ7 120 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 NPIPB13A6NJU9 1138 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 NPIPB4C9JG80 1138 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 RAB9BQ9NP90 201 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 POLQO75417 2590 aa7.47□□□□□ -1.21
SMARCAL1-202ENST00000358207 A0A096LNJ9 63 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM106CPP0CH98 169 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 ZNF137PP52743 207 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM106AQ4KMX7 169 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 FAM27BQ5VT28 67 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 OR8A1Q8NGG7 326 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 PIGCQ92535 297 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 CHAC1Q9BUX1 264 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 OR2H1Q9GZK4 316 aa7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 USP9XQ93008 2570 aaPredicted RBP7.46□□□□□ -1.21
SMARCAL1-202ENST00000358207 PTPN13Q12923 2485 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 P0C879 139 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 C10orf128Q5T292 105 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 RASL10AQ92737 203 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 HEYLQ9NQ87 328 aaPredicted RBP7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 CSMD1Q96PZ7 3565 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 IGHG3P01860 377 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 IFITM1P13164 125 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 CACNG7P62955 275 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 C12orf74Q32Q52 190 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 CEND1Q8N111 149 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 C1orf162Q8NEQ5 155 aaPredicted RBP7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 ZNF503Q96F45 646 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 VKORC1Q9BQB6 163 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 CXXC4Q9H2H0 198 aa7.46□□□□□ -1.22
SMARCAL1-202ENST00000358207 FCN3O75636 299 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 LINC00694P0DN24 101 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 MYOD1P15172 320 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 LOXL1Q08397 574 aaPredicted RBP7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 GAGE2BQ13066 116 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 GAGE2EQ4V326 116 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 TMEM78Q5T7P6 136 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 SPTSSAQ969W0 71 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 MAP1LC3AQ9H492 121 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 GAGE2DQ9UEU5 116 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 KIR2DS1A0A191URI9 304 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 SYNGR3O43761 229 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 RPL7P18124 248 aaKnown RBP7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 ERVK11-1P61568 191 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 HBBP68871 147 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 ADORA2A-AS1P86434 159 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 KIR2DS1Q14954 304 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 RRN3P1Q2M238 152 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 Q6ZQT7 251 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 ATP5L2Q7Z4Y8 100 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 MDP1Q86V88 176 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 RPEQ96AT9 228 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 TCF19Q9Y242 345 aa7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 RAI1Q7Z5J4 1906 aaPredicted RBP7.45□□□□□ -1.22
SMARCAL1-202ENST00000358207 PIGBOS1A0A0B4J2F0 54 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 OR1L8Q8NGR8 309 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 UBALD1Q8TB05 177 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 HIGD1BQ9P298 99 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 ONECUT1Q9UBC0 465 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 CSMD2Q7Z408 3487 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 WNK2Q9Y3S1 2297 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 ACTL6BO94805 426 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 APOHP02749 345 aaPredicted RBP7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 IGHV1-2P23083 117 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 LGALS9BQ3B8N2 356 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 TTC32Q5I0X7 151 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 LGALS9CQ6DKI2 356 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 FAM231DQ6ZW35 169 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 PPDPFLQ8WWR9 84 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 LINC01587Q99440 93 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 DOPEY1Q5JWR5 2465 aa7.44□□□□□ -1.22
SMARCAL1-202ENST00000358207 EVI2AP22794 236 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 ZNF816Q0VGE8 651 aaPredicted RBP7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 FBXL19-AS1Q494R0 122 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 DNAJC30Q96LL9 226 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 TRBV25-1A0A075B6N4 114 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 DNPH1O43598 174 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 SEM1Q6ZVN7 128 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 CXorf67Q86X51 503 aaPredicted RBP7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 FAM57AQ8TBR7 257 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 AKAP9Q99996 3911 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 ZNF688P0C7X2 276 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 FXYD7P58549 80 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 DRAM1Q8N682 238 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 ZNF488Q96MN9 340 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 C7orf69Q9H7B7 122 aa7.43□□□□□ -1.22
SMARCAL1-202ENST00000358207 IGKV3D-15A0A087WSY6 115 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 BRWD1-AS2P59051 145 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 RPL30P62888 115 aaKnown RBP7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 MRPL23Q16540 153 aaKnown RBP7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 C22orf34Q6ZV56 151 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 PRSS46E5RG02 174 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 MPDU1O75352 247 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 CRYGSP22914 178 aa7.42□□□□□ -1.22
SMARCAL1-202ENST00000358207 MPV17P39210 176 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms