RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 AMTP48728 403 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 C5orf64Q2M2E5 130 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 KIAA1644Q3SXP7 199 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 FBLN7Q53RD9 439 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 CCDC144NLQ6NUI1 221 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 SMR3AQ99954 134 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 PIMREGQ9BSJ6 248 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 VAMP8Q9BV40 100 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 PRSS22Q9GZN4 317 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 GFRA4Q9GZZ7 299 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 Q9H3A6 140 aa11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 TBL2Q9Y4P3 447 aaKnown RBP11.26□□□□□ -0.61
NIPAL3-203ENST00000358028 A0A1B0GXF2 115 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 FAM231BA6NCW3 169 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 M0R143 59 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 NDUFS8O00217 210 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 FAM162BQ5T6X4 162 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 MINOS1Q5TGZ0 78 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 LEMD1Q68G75 181 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 OR4B1Q8NGF8 309 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 NEU1Q99519 415 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 MIEN1Q9BRT3 115 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 FAM103A1Q9BTL3 118 aaKnown RBP11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 MINOS1-NBL1R4GNA1 71 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 ABCA1O95477 2261 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 ARHGAP32A7KAX9 2087 aa11.25□□□□□ -0.61
NIPAL3-203ENST00000358028 CSPG4Q6UVK1 2322 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 C19orf71A6NCJ1 209 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 HIGD1CA8MV81 97 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 M0QZK8 103 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 IGKV1-17P01599 117 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 SLC25A16P16260 332 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 SLAQ13239 276 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 KRTAP21-3Q3LHN1 58 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 PRR27Q6MZM9 219 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 S100A7AQ86SG5 101 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 DYNAPQ8N1N2 210 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 C18orf32Q8TCD1 76 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 SIRPDQ9H106 197 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 FBXL7Q9UJT9 491 aa11.24□□□□□ -0.61
NIPAL3-203ENST00000358028 IGHV4-61A0A0C4DH41 118 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 Q8N6K4 173 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 VN1R17PQ8TDU5 208 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 RCHY1Q96PM5 261 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 NPIPB5A8MRT5 1133 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 DIRC3C9JPN6 131 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 P01737 135 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 RAB4AP20338 218 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 KRTDAPP60985 99 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 RPH3ALQ9UNE2 315 aa11.23□□□□□ -0.61
NIPAL3-203ENST00000358028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.23□□□□□ -0.615e-6■□□□□ 9.9
NIPAL3-203ENST00000358028 FN1P02751 2386 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 H3BTX0 84 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 CD33P20138 364 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 HBBP68871 147 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 EBI3Q14213 229 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 GDF5OSQ5U4N7 250 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 Q86TA4 180 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 Q8N976 141 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 DAZAP1Q96EP5 407 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 SHANK2-AS3Q9BTD1 123 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 SVEP1Q4LDE5 3571 aa11.22□□□□□ -0.61
NIPAL3-203ENST00000358028 ANK3Q12955 4377 aaKnown RBP11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 IGHV2-70DA0A0C4DH43 119 aa11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 NCBP2LA6PVI3 153 aaKnown RBP11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 EREGO14944 169 aa11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 PMCHP20382 165 aa11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 LOXL1Q08397 574 aaPredicted RBP11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 ZNF48Q96MX3 618 aaPredicted RBP11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 SNHG12Q9BXW3 62 aa11.21□□□□□ -0.61
NIPAL3-203ENST00000358028 IGLV11-55A0A075B6I3 123 aa11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 H3BRN7 92 aa11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 NUTF2P61970 127 aaKnown RBP11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 KRTAP1-1Q07627 177 aa11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 RBPMS2Q6ZRY4 209 aaKnown RBP11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 NIT1Q86X76 327 aa11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 BPIFA4PQ86YQ2 179 aa11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 TTC9CQ8N5M4 171 aa11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 BORCS7Q96B45 105 aa11.21□□□□□ -0.62
NIPAL3-203ENST00000358028 TMEM11P17152 192 aa11.2□□□□□ -0.62
NIPAL3-203ENST00000358028 NDPQ00604 133 aa11.2□□□□□ -0.62
NIPAL3-203ENST00000358028 CYB5R2Q6BCY4 276 aa11.2□□□□□ -0.62
NIPAL3-203ENST00000358028 SGK494Q96LW2 274 aa11.2□□□□□ -0.62
NIPAL3-203ENST00000358028 FANCD2OSQ96PS1 177 aa11.2□□□□□ -0.62
NIPAL3-203ENST00000358028 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
NIPAL3-203ENST00000358028 WI2-2373I1.2A0A1W2PRP0 233 aa11.19□□□□□ -0.62
NIPAL3-203ENST00000358028 K7EQM0 130 aa11.19□□□□□ -0.62
NIPAL3-203ENST00000358028 TOX4O94842 621 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms