RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 H7BYZ3 331 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 CDKN1BP46527 198 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 C16orf74Q96GX8 76 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 SAV1Q9H4B6 383 aaPredicted RBP7.01□□□□□ -1.29
UPF2-202ENST00000357604 TRAV5A0A0B4J249 113 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 C7orf71A4D174 169 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 RAB19A4D1S5 217 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 RNF222A6NCQ9 220 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 C18orf65Q6ZTR6 163 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 OR11H4Q8NGC9 324 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 ANAPC16Q96DE5 110 aa7.01□□□□□ -1.29
UPF2-202ENST00000357604 FABP5P3A8MUU1 101 aa7□□□□□ -1.29
UPF2-202ENST00000357604 BUB3O43684 328 aa7□□□□□ -1.29
UPF2-202ENST00000357604 OR8A1Q8NGG7 326 aa7□□□□□ -1.29
UPF2-202ENST00000357604 ABCA4P78363 2273 aa7□□□□□ -1.29
UPF2-202ENST00000357604 TMEM213A2RRL7 107 aa7□□□□□ -1.29
UPF2-202ENST00000357604 SMIM9A6NGZ8 99 aa7□□□□□ -1.29
UPF2-202ENST00000357604 IGKV1-17P01599 117 aa7□□□□□ -1.29
UPF2-202ENST00000357604 CITED4Q96RK1 184 aa7□□□□□ -1.29
UPF2-202ENST00000357604 PIEZO2Q9H5I5 2752 aa7□□□□□ -1.29
UPF2-202ENST00000357604 ATRXP46100 2492 aa7□□□□□ -1.29
UPF2-202ENST00000357604 PNRC1Q12796 327 aaPredicted RBP7□□□□□ -1.29
UPF2-202ENST00000357604 FAM90A2PQ658T7 463 aa7□□□□□ -1.29
UPF2-202ENST00000357604 EIF4E3Q8N5X7 224 aaKnown RBP7□□□□□ -1.29
UPF2-202ENST00000357604 SLC35B3Q9H1N7 401 aa7□□□□□ -1.29
UPF2-202ENST00000357604 PSG8Q9UQ74 426 aa7□□□□□ -1.29
UPF2-202ENST00000357604 REV3LO60673 3130 aa7□□□□□ -1.29
UPF2-202ENST00000357604 IGLV1-51P01701 117 aa7□□□□□ -1.29
UPF2-202ENST00000357604 MBD3L1Q8WWY6 194 aa7□□□□□ -1.29
UPF2-202ENST00000357604 CYYR1Q96J86 154 aa7□□□□□ -1.29
UPF2-202ENST00000357604 PRADC1Q9BSG0 188 aa7□□□□□ -1.29
UPF2-202ENST00000357604 LSM4Q9Y4Z0 139 aaKnown RBP7□□□□□ -1.29
UPF2-202ENST00000357604 XIRP2A4UGR9 3374 aa7□□□□□ -1.29
UPF2-202ENST00000357604 B4DEV8 164 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 MEF2BQ02080 365 aaPredicted RBP6.99□□□□□ -1.29
UPF2-202ENST00000357604 C19orf54Q5BKX5 351 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 LENEPQ9Y5L5 61 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 BPTFQ12830 3046 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 CD7P09564 240 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 PRR20EP86478 221 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 PRR20CP86479 221 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 PRR20DP86480 221 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 PRR20BP86481 221 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 PRR20AP86496 221 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 TMEM61Q8N0U2 210 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 PRRC2AP48634 2157 aaKnown RBP6.99□□□□□ -1.29
UPF2-202ENST00000357604 MALRD1Q5VYJ5 2156 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 ADMP35318 185 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 UNQ9165/PRO28630Q6UXU0 137 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 HAPLN4Q86UW8 402 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 MYOZ3Q8TDC0 251 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 SLAQ13239 276 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 SGK494Q96LW2 274 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 ODF3Q96PU9 254 aa6.99□□□□□ -1.29
UPF2-202ENST00000357604 SVBPQ8N300 66 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 SMIM12Q96EX1 92 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 ZNF414Q96IQ9 312 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 XCL2Q9UBD3 114 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 SELENOKQ9Y6D0 94 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 HIVEP3Q5T1R4 2406 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 PKIAP61925 76 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 FHL3Q13643 280 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 Q6AWC8 147 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 FAM110AQ9BQ89 295 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 SPXQ9BT56 116 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 LOC102723971A0A1B0GUV8 181 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 HTN3P15516 51 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 IGKV2-40A0A087WW87 121 aaPredicted RBP6.98□□□□□ -1.29
UPF2-202ENST00000357604 DIRC3C9JPN6 131 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 IGKV2D-40P01614 121 aaPredicted RBP6.98□□□□□ -1.29
UPF2-202ENST00000357604 FXYD7P58549 80 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 COX19Q49B96 90 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 ZNF493Q6ZR52 646 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 URGCP-MRPS24S4R325 110 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 HIVEP2P31629 2446 aa6.98□□□□□ -1.29
UPF2-202ENST00000357604 A8MWL6 223 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 TCRAP04437 139 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 MGPP08493 103 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 SPART-AS1P0CW21 52 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 IL15RAQ13261 267 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 ZFP82Q8N141 532 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 DEFB125Q8N687 156 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 TRAV1-1A0A0B4J248 108 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 TRGV4A0A0C4DH28 118 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 G0S2P27469 103 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 CLLU1Q5K131 121 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 APRG1Q8IVJ8 170 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 OR2D3Q8NGH3 330 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 ZFAND3Q9H8U3 227 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 RPS10P5Q9NQ39 176 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 A0A1W2PPQ1 181 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 UBE2L6O14933 153 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 SNRPCP09234 159 aaKnown RBP6.97□□□□□ -1.29
UPF2-202ENST00000357604 HLA-DRB4P13762 266 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 HLA-DRB4X5D2U9 266 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 CADP27708 2225 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 COL6A3P12111 3177 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 KRBOX1C9JBD0 128 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 TMEM250H0YL14 139 aa6.97□□□□□ -1.29
UPF2-202ENST00000357604 KLK9Q2XQG4 91 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms