RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 A0A1W2PRD5 423 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 A0A1W2PRF3 423 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 A0A1W2PRM7 423 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 TCRBV4S1A1TA0A5B7 111 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 FNDC10F2Z333 226 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 CDX4O14627 284 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 LHBP01229 141 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 FGF6P10767 208 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 GLRXP35754 106 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 SUB1P53999 127 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 TEX45Q8NA69 505 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 PIEZO2Q9H5I5 2752 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 TRAV17A0A0B4J275 112 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 IGHG3P01860 377 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 POU2AF1Q16633 256 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 ZNF474Q6S9Z5 364 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 PRNTQ86SH4 94 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 CIARTQ8N365 385 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 TTC9CQ8N5M4 171 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 TMEM116Q8NCL8 245 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 ARPC1AQ92747 370 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 RPP21Q9H633 154 aaKnown RBP6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 DKK4Q9UBT3 224 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 A8MWL6 223 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 LYZP61626 148 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 RPL32P62910 135 aaKnown RBP6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 C22orf34Q6ZV56 151 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 OR4C13Q8NGP0 309 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 OSR1Q8TAX0 266 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 GTSF1Q8WW33 167 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 RITA1Q96K30 269 aa6.6□□□□□ -1.35
CDC42SE1-201ENST00000357235 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 BRI3O95415 125 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 CFHR2P36980 270 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 Q71RC1 249 aaPredicted RBP6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 BOD1L2Q8IYS8 172 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 EXOC3-AS1Q8N2X6 119 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 ZNF714Q96N38 554 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 WNK2Q9Y3S1 2297 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 SIVA1O15304 175 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 TM4SF20Q53R12 229 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 GOLT1AQ6ZVE7 132 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 C20orf78Q9BR46 151 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 Q9H3A6 140 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 TNFRSF18Q9Y5U5 241 aa6.59□□□□□ -1.35
CDC42SE1-201ENST00000357235 ACACAQ13085 2346 aa6.59□□□□□ -1.36
CDC42SE1-201ENST00000357235 IGKV1D-37A0A075B6S9 117 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 A0A1W2PPI3 338 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 INSL3P51460 131 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 SEM1Q6ZVN7 128 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 FAM231DQ6ZW35 169 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 NDFIP1Q9BT67 221 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 SIGLEC8Q9NYZ4 499 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 TMSB15BA0A087X1C1 80 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 LOC389332A0A1B0GUA5 103 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 GCSHP23434 173 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 FXYD7P58549 80 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 SYT8Q8NBV8 401 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 H3BMG7 143 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 RBP4P02753 201 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 MT-ATP8P03928 68 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZNF883P0CG24 379 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 TMEM200BQ69YZ2 307 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 ATP5L2Q7Z4Y8 100 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 ABHD17AQ96GS6 310 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 TMUB1Q9BVT8 246 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 LINC00312Q9Y6C7 94 aa6.58□□□□□ -1.36
CDC42SE1-201ENST00000357235 CGB1A6NKQ9 187 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 CNTFRP26992 372 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 VMA21Q3ZAQ7 101 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 GAGE13Q4V321 117 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 RBPMS2Q6ZRY4 209 aaKnown RBP6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZADH2Q8N4Q0 377 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 SRSF12Q8WXF0 261 aaKnown RBP6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 F11RQ9Y624 299 aaKnown RBP6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 NBASA2RRP1 2371 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 MED13LQ71F56 2210 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 TNFRSF13BO14836 293 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 TCRAP04437 139 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 KLRD1Q13241 179 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 PLGLAQ15195 96 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZNF833PQ6ZTB9 187 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 OR8A1Q8NGG7 326 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 OR5AN1Q8NGI8 311 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 PRSS3P2Q8NHM4 247 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 INSIG2Q9Y5U4 225 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 S4R3C0 116 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 CACNA1BQ00975 2339 aa6.57□□□□□ -1.36
CDC42SE1-201ENST00000357235 A0A1B0GWB2 263 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 TM4SF5O14894 197 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZZEF1O43149 2961 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 APOMO95445 188 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 ATP5IP56385 69 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 LYPD2Q6UXB3 125 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 C1QTNF4Q9BXJ3 329 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 MALRD1Q5VYJ5 2156 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 ABCA4P78363 2273 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 SPTA1P02549 2419 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 A0A1B0GXF2 115 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms