RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SPXQ9BT56 116 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 PRO1854Q9UHT4 67 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 OOSP1A8MZH6 123 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 CD24P25063 80 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 RPL36AP83881 106 aaKnown RBP10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 RPL36ALQ969Q0 106 aaKnown RBP10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 COL4A5P29400 1685 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 PRIMA1Q86XR5 153 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 IL18BPO95998 194 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 CCL19Q99731 98 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 IGKV1-6A0A0C4DH72 117 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 FGF6P10767 208 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 TRBV7-1A0A0A6YYK4 115 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 PMVKQ15126 192 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 ZNF114Q8NC26 417 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 VWCEQ96DN2 955 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 SIGLEC9Q9Y336 463 aa10.32□□□□□ -0.76
SYNCRIP-201ENST00000355238 PF4P02776 101 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 ZNF883P0CG24 379 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 COX6B1P14854 86 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 VOPP1Q96AW1 172 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 SVILO95425 2214 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 SCN10AQ9Y5Y9 1956 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 CEACAM8P31997 349 aaPredicted RBP10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 MRPL51Q4U2R6 128 aaKnown RBP10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 TRAV41A0A0B4J266 112 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 KLF5Q13887 457 aaPredicted RBP10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 HLA-DMBP28068 263 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 FOXG1P55316 489 aaPredicted RBP10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 HAPLN4Q86UW8 402 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 ERCC8Q13216 396 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 IL15RAQ13261 267 aa10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 ZNF625Q96I27 306 aaPredicted RBP10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 C1orf147Q96MC9 270 aaPredicted RBP10.31□□□□□ -0.76
SYNCRIP-201ENST00000355238 PRB3Q04118 309 aaPredicted RBP10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 TRPT1Q86TN4 253 aaKnown RBP10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 DTX1Q86Y01 620 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 SIGLEC8Q9NYZ4 499 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 TP53TG1Q9Y2A0 90 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 LRRK1Q38SD2 2015 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 COL11A2P13942 1736 aaPredicted RBP10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 GREB1Q4ZG55 1949 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 MLANAQ16655 118 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 WIPF2Q8TF74 440 aaPredicted RBP10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 PYGO2Q9BRQ0 406 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 PRADC1Q9BSG0 188 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 PLXNA1Q9UIW2 1896 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 PRR19A6NJB7 356 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 HLA-DRB4P13762 266 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 SRD5A1P18405 259 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 HLA-DRB4X5D2U9 266 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 PINLYPA6NC86 204 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 C12orf74Q32Q52 190 aa10.3□□□□□ -0.76
SYNCRIP-201ENST00000355238 PTPRZ1P23471 2315 aaPredicted RBP10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 LINC00205P59089 165 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 C5orf64Q2M2E5 130 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 MINOS1Q5TGZ0 78 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 SPRR3Q9UBC9 169 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 MINOS1-NBL1R4GNA1 71 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 F8VRH5 84 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 VWC2Q2TAL6 325 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 DTX2Q86UW9 622 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 B5MCH6 92 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 WNT2P09544 360 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 C7orf69Q9H7B7 122 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 UBL5Q9BZL1 73 aa10.29□□□□□ -0.76
SYNCRIP-201ENST00000355238 ANKRD29Q8N6D5 301 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 RNASE6Q93091 150 aaKnown RBP10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 K7ERJ3 54 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 IGHG4P01861 327 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 C6orf226Q5I0X4 101 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 WFDC12Q8WWY7 111 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 GAFA1Q96PS6 74 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 MRPL35Q9NZE8 188 aaKnown RBP10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 LCTP09848 1927 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 FAM168AQ92567 244 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 PRSS22Q9GZN4 317 aa10.28□□□□□ -0.76
SYNCRIP-201ENST00000355238 IGKV1D-17A0A075B6S4 117 aa10.27□□□□□ -0.76
SYNCRIP-201ENST00000355238 C15orf53Q8NAA6 179 aa10.27□□□□□ -0.76
SYNCRIP-201ENST00000355238 CITED2Q99967 270 aaPredicted RBP10.27□□□□□ -0.76
SYNCRIP-201ENST00000355238 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 TMEM178BH3BS89 294 aa10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 NRXN2Q9P2S2 1712 aa10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 DEFB104AQ8WTQ1 72 aa10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 C1orf159Q96HA4 380 aa10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 IGHV3-73A0A0B4J1V6 119 aa10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 MORN5Q5VZ52 161 aa10.27□□□□□ -0.77
SYNCRIP-201ENST00000355238 IGKV1-39P01597 117 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 IGKV1D-39P04432 117 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 C8orf49Q96NF6 230 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms