RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FOXA2Q9Y261 457 aaPredicted RBP7.53□□□□□ -1.2
SMG6-202ENST00000354901 MUC6Q6W4X9 2439 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 FAM90A9PA6NNJ1 464 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 SMAD7O15105 426 aaKnown RBP7.53□□□□□ -1.2
SMG6-202ENST00000354901 FAM106CPP0CH98 169 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 AREGP15514 252 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 FAM106AQ4KMX7 169 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 ZNF418Q8TF45 676 aaPredicted RBP7.53□□□□□ -1.2
SMG6-202ENST00000354901 GRAMD2BQ96HH9 432 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 AKAP6Q13023 2319 aa7.53□□□□□ -1.2
SMG6-202ENST00000354901 WNK2Q9Y3S1 2297 aa7.52□□□□□ -1.2
SMG6-202ENST00000354901 IGHV3-72A0A0B4J1Y9 119 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 TRGV8A0A0C4DH27 118 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 E7EUB6 86 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 APOMO95445 188 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 CD40P25942 277 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 MORN5Q5VZ52 161 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 FLYWCH2Q96CP2 140 aaKnown RBP7.52□□□□□ -1.21
SMG6-202ENST00000354901 UPK2O00526 184 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 SLC25A5P05141 298 aaKnown RBP7.52□□□□□ -1.21
SMG6-202ENST00000354901 SSBP2P81877 361 aaPredicted RBP7.52□□□□□ -1.21
SMG6-202ENST00000354901 KLF5Q13887 457 aaPredicted RBP7.52□□□□□ -1.21
SMG6-202ENST00000354901 CR1LQ2VPA4 569 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 OSR1Q8TAX0 266 aaPredicted RBP7.52□□□□□ -1.21
SMG6-202ENST00000354901 PRNDQ9UKY0 176 aa7.52□□□□□ -1.21
SMG6-202ENST00000354901 SPTBN1Q01082 2364 aaKnown RBP7.51□□□□□ -1.21
SMG6-202ENST00000354901 IGHV3-21A0A0B4J1V1 117 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 FAM90A27PA6NNH2 459 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 FAM162BQ5T6X4 162 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 PGPEP1Q9NXJ5 209 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 SLC25A10Q9UBX3 287 aaPredicted RBP7.51□□□□□ -1.21
SMG6-202ENST00000354901 RPUSD1Q9UJJ7 312 aaKnown RBP7.51□□□□□ -1.21
SMG6-202ENST00000354901 INSIG2Q9Y5U4 225 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 IGLV3-9A0A075B6K5 115 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 P01737 135 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 CSN1S1P47710 185 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 PRR20EP86478 221 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 PRR20CP86479 221 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 PRR20DP86480 221 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 PRR20BP86481 221 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 PRR20AP86496 221 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 LOXL1Q08397 574 aaPredicted RBP7.51□□□□□ -1.21
SMG6-202ENST00000354901 COL25A1Q9BXS0 654 aaPredicted RBP7.51□□□□□ -1.21
SMG6-202ENST00000354901 COL6A6A6NMZ7 2263 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 TRBV20-1A0A075B6N2 111 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 hADV38S2A0JD32 116 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 ENSAO43768 121 aaKnown RBP7.51□□□□□ -1.21
SMG6-202ENST00000354901 PRCDQ00LT1 54 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 OR10X1Q8NGY0 326 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 MBD6Q96DN6 1003 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 ZNF503Q96F45 646 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 LY96Q9Y6Y9 160 aa7.51□□□□□ -1.21
SMG6-202ENST00000354901 LTAP01374 205 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 RPL32P62910 135 aaKnown RBP7.5□□□□□ -1.21
SMG6-202ENST00000354901 GAGE13Q4V321 117 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 RAB9BQ9NP90 201 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 CYSLTR1Q9Y271 337 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 NPIPB5A8MRT5 1133 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 SLC25A48Q6ZT89 311 aaKnown RBP7.5□□□□□ -1.21
SMG6-202ENST00000354901 CHCHD1Q96BP2 118 aaKnown RBP7.5□□□□□ -1.21
SMG6-202ENST00000354901 UBTD1Q9HAC8 227 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 SSUH2Q9Y2M2 353 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 PEX7O00628 323 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 RNASE2P10153 161 aaKnown RBP7.5□□□□□ -1.21
SMG6-202ENST00000354901 TCTEX1D4Q5JR98 221 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 LINC01545Q5VT33 79 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 LYPD2Q6UXB3 125 aa7.5□□□□□ -1.21
SMG6-202ENST00000354901 ARHGAP32A7KAX9 2087 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 ATRXP46100 2492 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 H3BVH4 76 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 Q6ZS92 163 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.49□□□□□ -1.21
SMG6-202ENST00000354901 NPIPB3Q92617 1050 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 PTH2Q96A98 100 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 IGF2BP2-AS1Q96M15 143 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 TRAV8-1A0A0A6YYK1 113 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 CRXO43186 299 aaPredicted RBP7.49□□□□□ -1.21
SMG6-202ENST00000354901 FGF6P10767 208 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 IFI27P40305 119 aaPredicted RBP7.49□□□□□ -1.21
SMG6-202ENST00000354901 BSPH1Q075Z2 132 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 HCP5Q6MZN7 132 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 ASCL5Q7RTU5 278 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 RBMXL3Q8N7X1 1067 aaKnown RBP7.49□□□□□ -1.21
SMG6-202ENST00000354901 ZNF414Q96IQ9 312 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 ZNF747Q9BV97 191 aa7.49□□□□□ -1.21
SMG6-202ENST00000354901 RELNP78509 3460 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 A0A1W2PRD5 423 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 A0A1W2PRF3 423 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 A0A1W2PRM7 423 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 GATA4P43694 442 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 ERHP84090 104 aaKnown RBP7.48□□□□□ -1.21
SMG6-202ENST00000354901 LINC00322Q6ZN03 302 aaPredicted RBP7.48□□□□□ -1.21
SMG6-202ENST00000354901 ZNF714Q96N38 554 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 TPSG1Q9NRR2 321 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 DKK2Q9UBU2 259 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 LRBAP50851 2863 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 LOC107984156A0A0G2JMH3 177 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 PRSS29PA6NIE9 313 aa7.48□□□□□ -1.21
SMG6-202ENST00000354901 OR2J3O76001 311 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms