RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 LHBP01229 141 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 APELAP0DMC3 54 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 MEOX1P50221 254 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 ODF1Q14990 250 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 INTS1Q8N201 2190 aaKnown RBP11.28□□□□□ -0.6
RLIM-202ENST00000349225 K7ESF4 209 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 TMEM164Q5U3C3 297 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 MAPKAPK5-AS1Q8N8E1 139 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 KIR2DL2P43627 348 aaPredicted RBP11.28□□□□□ -0.6
RLIM-202ENST00000349225 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 C8orf49Q96NF6 230 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 LINC00312Q9Y6C7 94 aa11.28□□□□□ -0.6
RLIM-202ENST00000349225 CRYGCP07315 174 aa11.27□□□□□ -0.61
RLIM-202ENST00000349225 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
RLIM-202ENST00000349225 ZNF48Q96MX3 618 aaPredicted RBP11.27□□□□□ -0.61
RLIM-202ENST00000349225 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
RLIM-202ENST00000349225 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
RLIM-202ENST00000349225 GTSCR1Q86UQ5 136 aa11.27□□□□□ -0.61
RLIM-202ENST00000349225 ZNF479Q96JC4 524 aa11.27□□□□□ -0.61
RLIM-202ENST00000349225 COL27A1Q8IZC6 1860 aaPredicted RBP11.26□□□□□ -0.61
RLIM-202ENST00000349225 TMSB15BA0A087X1C1 80 aa11.26□□□□□ -0.61
RLIM-202ENST00000349225 CT45A10P0DMU9 189 aa11.26□□□□□ -0.61
RLIM-202ENST00000349225 MBNL2Q5VZF2 373 aaKnown RBP11.26□□□□□ -0.61
RLIM-202ENST00000349225 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
RLIM-202ENST00000349225 TMEM105Q8N8V8 129 aa11.26□□□□□ -0.61
RLIM-202ENST00000349225 OTORQ9NRC9 128 aa11.26□□□□□ -0.61
RLIM-202ENST00000349225 NPIPB5A8MRT5 1133 aa11.26□□□□□ -0.61
RLIM-202ENST00000349225 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
RLIM-202ENST00000349225 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
RLIM-202ENST00000349225 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
RLIM-202ENST00000349225 TNFRSF1AP19438 455 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 C8orf46Q8TAG6 207 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 MT-ATP8P03928 68 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 SMCPP49901 116 aaPredicted RBP11.25□□□□□ -0.61
RLIM-202ENST00000349225 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 TRGV9Q99603 122 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 BOD1L1Q8NFC6 3051 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 IGHV1-18A0A0C4DH31 117 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 DEFB108BQ8NET1 73 aa11.25□□□□□ -0.61
RLIM-202ENST00000349225 TSPAN13O95857 204 aa11.24□□□□□ -0.61
RLIM-202ENST00000349225 Q6ZT83 130 aa11.24□□□□□ -0.61
RLIM-202ENST00000349225 C8orf86Q6ZUL3 223 aa11.24□□□□□ -0.61
RLIM-202ENST00000349225 J3QR89 54 aa11.24□□□□□ -0.61
RLIM-202ENST00000349225 GAGE13Q4V321 117 aa11.24□□□□□ -0.61
RLIM-202ENST00000349225 GAFA1Q96PS6 74 aa11.24□□□□□ -0.61
RLIM-202ENST00000349225 LINC00574Q9H8X3 128 aa11.24□□□□□ -0.61
RLIM-202ENST00000349225 MRPL16Q9NX20 251 aaKnown RBP11.24□□□□□ -0.61
RLIM-202ENST00000349225 A0A1B0GW15 77 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 LINC01548A6NM66 108 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 TDHQ8IZJ6 230 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 CCL13Q99616 98 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 PATE3B3GLJ2 98 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 PSG8Q9UQ74 426 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 VSTM5A8MXK1 200 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 M0R3E3 92 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 SYT8Q8NBV8 401 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
RLIM-202ENST00000349225 SLC25A39Q9BZJ4 359 aaPredicted RBP11.23□□□□□ -0.61
RLIM-202ENST00000349225 TRBV6-1A0A0K0K1D8 114 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 SPRY3O43610 288 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 FCN3O75636 299 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 XGP55808 180 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 TMEM75Q8N9X5 138 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 ZC2HC1BQ5TFG8 222 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 C6orf15Q6UXA7 325 aaPredicted RBP11.22□□□□□ -0.61
RLIM-202ENST00000349225 IGLV1-44P01699 117 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 LYZP61626 148 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 SIGLEC15Q6ZMC9 328 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 ZNF418Q8TF45 676 aaPredicted RBP11.22□□□□□ -0.61
RLIM-202ENST00000349225 RNF183Q96D59 192 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 MSRB1Q9NZV6 116 aa11.22□□□□□ -0.61
RLIM-202ENST00000349225 EVI2AP22794 236 aa11.21□□□□□ -0.61
RLIM-202ENST00000349225 TTC9CQ8N5M4 171 aa11.21□□□□□ -0.61
RLIM-202ENST00000349225 TMEM178AQ8NBL3 297 aa11.21□□□□□ -0.61
RLIM-202ENST00000349225 MDS2Q8NDY4 140 aa11.21□□□□□ -0.61
RLIM-202ENST00000349225 TMEM133Q9H2Q1 129 aa11.21□□□□□ -0.61
RLIM-202ENST00000349225 COLQQ9Y215 455 aaPredicted RBP11.21□□□□□ -0.61
RLIM-202ENST00000349225 TRGV5A0A0B4J1U4 118 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 FOXI1Q12951 378 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 CNEP1R1Q8N9A8 125 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 IGKCP01834 107 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 CCL3L1P16619 93 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 CKS2P33552 79 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 LEPP41159 167 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.62
RLIM-202ENST00000349225 RNF185Q96GF1 192 aa11.21□□□□□ -0.62
RLIM-202ENST00000349225 TRBV19A0A075B6N1 114 aa11.2□□□□□ -0.62
RLIM-202ENST00000349225 A0A1B0GWB2 263 aa11.2□□□□□ -0.62
RLIM-202ENST00000349225 TMEM8BA6NDV4 472 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms