RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MRPL51Q4U2R6 128 aaKnown RBP14.63□□□□□ -0.07
SMC4-201ENST00000344722 OR11H6Q8NGC7 330 aa14.63□□□□□ -0.07
SMC4-201ENST00000344722 TDRG1Q3Y452 100 aa14.63□□□□□ -0.07
SMC4-201ENST00000344722 WNT2P09544 360 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 SRSF8Q9BRL6 282 aaKnown RBP14.62□□□□□ -0.07
SMC4-201ENST00000344722 OVOL2Q9BRP0 275 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 NPFFR1Q9GZQ6 430 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 SIGLEC9Q9Y336 463 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 RP1L1Q8IWN7 2480 aaPredicted RBP14.62□□□□□ -0.07
SMC4-201ENST00000344722 RLFQ13129 1914 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 PRB3Q04118 309 aaPredicted RBP14.62□□□□□ -0.07
SMC4-201ENST00000344722 ZNF524Q96C55 264 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 H3BMG7 143 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 ZNF688P0C7X2 276 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 PAX8Q06710 450 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 NEGR1Q7Z3B1 354 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 NDUFA4L2Q9NRX3 87 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 S100A7L2Q5SY68 101 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 LINC00477Q96M19 166 aa14.62□□□□□ -0.07
SMC4-201ENST00000344722 TRAV8-3A0A0A6YYJ7 113 aa14.61□□□□□ -0.07
SMC4-201ENST00000344722 C9orf139Q6ZV77 190 aa14.61□□□□□ -0.07
SMC4-201ENST00000344722 LINC01560Q8TB33 94 aa14.61□□□□□ -0.07
SMC4-201ENST00000344722 LINC01587Q99440 93 aa14.61□□□□□ -0.07
SMC4-201ENST00000344722 CACNA1DQ01668 2161 aa14.61□□□□□ -0.07
SMC4-201ENST00000344722 PLXNA4Q9HCM2 1894 aa14.61□□□□□ -0.07
SMC4-201ENST00000344722 NPC2P61916 151 aa14.61□□□□□ -0.07
SMC4-201ENST00000344722 WISP1O95388 367 aa14.61□□□□□ -0.07
SMC4-201ENST00000344722 C14orf178Q8N769 122 aaPredicted RBP14.6□□□□□ -0.07
SMC4-201ENST00000344722 DNAJC13O75165 2243 aa14.6□□□□□ -0.07
SMC4-201ENST00000344722 ZNF747Q9BV97 191 aa14.6□□□□□ -0.07
SMC4-201ENST00000344722 C1QTNF4Q9BXJ3 329 aa14.6□□□□□ -0.07
SMC4-201ENST00000344722 VWA8A3KMH1 1905 aa14.6□□□□□ -0.07
SMC4-201ENST00000344722 WDR81Q562E7 1941 aa14.6□□□□□ -0.07
SMC4-201ENST00000344722 IGHV3OR16-10A0A075B7F0 116 aa14.6□□□□□ -0.07
SMC4-201ENST00000344722 PRR20EP86478 221 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 PRR20CP86479 221 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 PRR20DP86480 221 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 PRR20BP86481 221 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 PRR20AP86496 221 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 RSPO1Q2MKA7 263 aaPredicted RBP14.59□□□□□ -0.07
SMC4-201ENST00000344722 A0A1W2PPI3 338 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 TRBV19A0A075B6N1 114 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 K7ERJ3 54 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 IGHV3-11P01762 117 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 HIST1H4AP62805 103 aaKnown RBP14.59□□□□□ -0.07
SMC4-201ENST00000344722 SLC25A16P16260 332 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 C15orf32Q32M92 178 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 ZNF474Q6S9Z5 364 aaPredicted RBP14.59□□□□□ -0.07
SMC4-201ENST00000344722 C8orf49Q96NF6 230 aa14.59□□□□□ -0.07
SMC4-201ENST00000344722 TIMM21Q9BVV7 248 aa14.58□□□□□ -0.07
SMC4-201ENST00000344722 C9orf172C9J069 976 aa14.58□□□□□ -0.08
SMC4-201ENST00000344722 BOD1L2Q8IYS8 172 aa14.58□□□□□ -0.08
SMC4-201ENST00000344722 TMEM14CQ9P0S9 112 aa14.58□□□□□ -0.08
SMC4-201ENST00000344722 A0A0U1RRA0 63 aa14.58□□□□□ -0.08
SMC4-201ENST00000344722 ZNF876PQ49A33 203 aa14.58□□□□□ -0.08
SMC4-201ENST00000344722 CFAP161Q6P656 301 aa14.58□□□□□ -0.08
SMC4-201ENST00000344722 NTN3O00634 580 aaPredicted RBP14.58□□□□□ -0.08
SMC4-201ENST00000344722 CRPP02741 224 aa14.58□□□□□ -0.08
SMC4-201ENST00000344722 CITED1Q99966 193 aa14.58□□□□□ -0.08
SMC4-201ENST00000344722 SLC25A20O43772 301 aa14.57□□□□□ -0.08
SMC4-201ENST00000344722 C12orf74Q32Q52 190 aa14.57□□□□□ -0.08
SMC4-201ENST00000344722 TMEM141Q96I45 108 aa14.57□□□□□ -0.08
SMC4-201ENST00000344722 BRWD3Q6RI45 1802 aa14.57□□□□□ -0.08
SMC4-201ENST00000344722 DOCK11Q5JSL3 2073 aa14.57□□□□□ -0.08
SMC4-201ENST00000344722 TMEM178BH3BS89 294 aa14.57□□□□□ -0.08
SMC4-201ENST00000344722 MDC1Q14676 2089 aaKnown RBP14.57□□□□□ -0.08
SMC4-201ENST00000344722 LYPD6Q86Y78 171 aa14.57□□□□□ -0.08
SMC4-201ENST00000344722 ABHD17AQ96GS6 310 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 SCRT2Q9NQ03 307 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 C2orf66Q6UXQ4 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 RASL10AQ92737 203 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 FXYD5Q96DB9 178 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 NDUFS7O75251 213 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 GAGE12JA6NER3 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 GAGE7O76087 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 GAGE12FP0CL80 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 GAGE12GP0CL81 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 GAGE12IP0CL82 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 UCNP55089 124 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 Q0VFX4 171 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 GAGE4Q13068 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 RNASE6Q93091 150 aaKnown RBP14.56□□□□□ -0.08
SMC4-201ENST00000344722 TPRP12270 2363 aaKnown RBP14.56□□□□□ -0.08
SMC4-201ENST00000344722 TCF15Q12870 199 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 GAGE5Q13069 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 GAGE6Q13070 117 aa14.56□□□□□ -0.08
SMC4-201ENST00000344722 LTAP01374 205 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 Q8NFD4 153 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 MRPL35Q9NZE8 188 aaKnown RBP14.55□□□□□ -0.08
SMC4-201ENST00000344722 BUB1B-PAK6H3BSN5 160 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 IGFL4Q6B9Z1 124 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 TMEM86BQ8N661 226 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 SAP30O75446 220 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 HLA-DRB4P13762 266 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 C5orf64Q2M2E5 130 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 GAGE2AQ6NT46 116 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 ITLN2Q8WWU7 325 aaPredicted RBP14.55□□□□□ -0.08
SMC4-201ENST00000344722 HLA-DRB4X5D2U9 266 aa14.55□□□□□ -0.08
SMC4-201ENST00000344722 SNRNP200O75643 2136 aaKnown RBP14.55□□□□□ -0.08
SMC4-201ENST00000344722 ARHGEF17Q96PE2 2063 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms