RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SLAQ13239 276 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 C15orf32Q32M92 178 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 PAPPA-AS1Q5QFB9 102 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 DUX3Q96PT4 197 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 SUMO2P61956 95 aaKnown RBP6.54□□□□□ -1.36
UBE4B-202ENST00000343090 ASPHD1Q5U4P2 390 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 DEFB125Q8N687 156 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 TNFRSF18Q9Y5U5 241 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 V9GYV3 84 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 D6R8Y8 96 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 PPP1R17O96001 155 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 TOMM40O96008 361 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 NDPQ00604 133 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 JMJD8Q96S16 334 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 LYZL1Q6UWQ5 148 aa6.54□□□□□ -1.36
UBE4B-202ENST00000343090 CD300EQ496F6 205 aaPredicted RBP6.54□□□□□ -1.36
UBE4B-202ENST00000343090 PRR30Q53SZ7 412 aaPredicted RBP6.54□□□□□ -1.36
UBE4B-202ENST00000343090 IGKV3D-20A0A0C4DH25 116 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 BUB1B-PAK6H3BSN5 160 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 CNTFRP26992 372 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 ZC2HC1AQ96GY0 325 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 SIGLEC9Q9Y336 463 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 IFI27L1Q96BM0 104 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 TRGV9Q99603 122 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 PLXNB3Q9ULL4 1909 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 ZNF815PA8K554 130 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 BRD3OSQ6XYD6 125 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 ZNF329Q86UD4 541 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 USF3Q68DE3 2245 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 A0A1W2PPM0 123 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 HOXA3O43365 443 aaPredicted RBP6.53□□□□□ -1.36
UBE4B-202ENST00000343090 NDUFB8O95169 186 aa6.53□□□□□ -1.36
UBE4B-202ENST00000343090 TMEM262E9PQX1 116 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 TAX1BP3O14907 124 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 TSPAN13O95857 204 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 PAX8Q06710 450 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 GAGE2BQ13066 116 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 GAGE2EQ4V326 116 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 C11orf44Q8N8P7 122 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 LINC01587Q99440 93 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 GAGE2DQ9UEU5 116 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 A0A1W2PPI3 338 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 SMKR1H3BMG3 65 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 PSMG4Q5JS54 123 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 GTSCR1Q86UQ5 136 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 PCNX1Q96RV3 2341 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 DNAL4O96015 105 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 ETDBQ3ZM63 59 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 SIGLEC15Q6ZMC9 328 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 IGHV1-24A0A0C4DH33 117 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 E7EQL1 145 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 K7EN84 100 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 COX8AP10176 69 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 PRSS57Q6UWY2 283 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 Q6ZS92 163 aa6.52□□□□□ -1.37
UBE4B-202ENST00000343090 SH2D1AO60880 128 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 IGKCP01834 107 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 C10orf126Q8N4M7 172 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 SS18L2Q9UHA2 77 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 CADP27708 2225 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 WNK2Q9Y3S1 2297 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 IGHV3-64A0A075B6Q5 118 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 TRAV41A0A0B4J266 112 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 DPM2O94777 84 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 IGLV3-1P01715 115 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 C5orf64Q2M2E5 130 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 CACNA1HO95180 2353 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 DOCK10Q96BY6 2186 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 ALPK3Q96L96 1907 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 TRAV21A0A0B4J279 112 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.51□□□□□ -1.37
UBE4B-202ENST00000343090 ZNF134P52741 427 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 SRSF1Q07955 248 aaKnown RBP eCLIP6.51□□□□□ -1.37
UBE4B-202ENST00000343090 VWC2Q2TAL6 325 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 TMEM249Q2WGJ8 235 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 EP400Q96L91 3159 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 A8MWV9 139 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 PAX1P15863 534 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 CHAC1Q9BUX1 264 aa6.51□□□□□ -1.37
UBE4B-202ENST00000343090 H7C1H1 209 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 OR13C6PQ8NH95 151 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 NXT2Q9NPJ8 142 aaKnown RBP6.5□□□□□ -1.37
UBE4B-202ENST00000343090 PRTN3P24158 256 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 C17orf58Q2M2W7 97 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 TMEM14BQ9NUH8 114 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 KIAA1671Q9BY89 1806 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 TEX48A0A1B0GUV7 120 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 ERCC8Q13216 396 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 LYPD6Q86Y78 171 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 TOMM7Q9P0U1 55 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 SMIM27A0A1W2PRY6 76 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 GHRHP01286 108 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 DIAPH2-AS1Q14236 149 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 AMN1Q8IY45 258 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 CITED1Q99966 193 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 NPFFR1Q9GZQ6 430 aa6.5□□□□□ -1.37
UBE4B-202ENST00000343090 G3V4G9 280 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms