RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 DUX4L9Q6RFH8 374 aaPredicted RBP9.2□□□□□ -0.94
TNC-201ENST00000341037 Q86TA4 180 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 BCL6BQ8N143 479 aaPredicted RBP9.2□□□□□ -0.94
TNC-201ENST00000341037 SPOCK3Q9BQ16 436 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 SIP14410 1827 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 AMBPP02760 352 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 LINC00479Q96M42 142 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 TIMM21Q9BVV7 248 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 A0A1W2PPI3 338 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 DAD1P61803 113 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 NDUFAF3Q9BU61 184 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 FNDC1Q4ZHG4 1894 aaPredicted RBP9.2□□□□□ -0.94
TNC-201ENST00000341037 TRBV6-6A0A0A6YYG2 114 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 RP1P56715 2156 aa9.2□□□□□ -0.94
TNC-201ENST00000341037 TRAV8-3A0A0A6YYJ7 113 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 G3V318 75 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 GAGE2EQ4V326 116 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 ZNF48Q96MX3 618 aaPredicted RBP9.19□□□□□ -0.94
TNC-201ENST00000341037 GAGE2DQ9UEU5 116 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 IGHV1-69DA0A0B4J2H0 117 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 NDUFS8O00217 210 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 IGHV1-69P01742 117 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
TNC-201ENST00000341037 TMEM256Q8N2U0 113 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 SHANK2-AS3Q9BTD1 123 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 PLXNA3P51805 1871 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 RASL11AQ6T310 242 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 RP1L1Q8IWN7 2480 aaPredicted RBP9.19□□□□□ -0.94
TNC-201ENST00000341037 UBE2E1P51965 193 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 TMEM242Q9NWH2 141 aa9.19□□□□□ -0.94
TNC-201ENST00000341037 VWA8A3KMH1 1905 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 LINC01549A6NIU2 74 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 NDUFB8O95169 186 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 ASXL3Q9C0F0 2248 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 ARMS2P0C7Q2 107 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 TNFSF13O75888 250 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 PRIMA1Q86XR5 153 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 IGHV2-70DA0A0C4DH43 119 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 MYMXA0A1B0GTQ4 84 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 AZU1P20160 251 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 C2orf82Q6UX34 121 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 LYPD1Q8N2G4 141 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 CACNA1IQ9P0X4 2223 aa9.18□□□□□ -0.94
TNC-201ENST00000341037 TMEM213A2RRL7 107 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 PAX9P55771 341 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 ZNF562Q6V9R5 426 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 A0A1B0GW64 132 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 SEC11AP67812 179 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 TRPT1Q86TN4 253 aaKnown RBP9.17□□□□□ -0.94
TNC-201ENST00000341037 LIME1Q9H400 295 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 KIF26BQ2KJY2 2108 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 MGAMO43451 1857 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 TRAV1-1A0A0B4J248 108 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 IGHV3-38A0A0C4DH36 116 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 Q6ZRM9 215 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 A0A096LPF7 62 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 FREM3P0C091 2139 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 CEACAM8P31997 349 aaPredicted RBP9.17□□□□□ -0.94
TNC-201ENST00000341037 FAM120AOSQ5T036 256 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 GAGE12BA1L429 117 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 COLCA2A8K830 154 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 GAGE7O76087 117 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 GAGE12FP0CL80 117 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 GAGE12GP0CL81 117 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 GAGE12IP0CL82 117 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 SIGMAR1Q99720 223 aa9.17□□□□□ -0.94
TNC-201ENST00000341037 ESDP10768 282 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 MPDZO75970 2070 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 ZNF561-AS1K7EIQ3 104 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 CGB3P0DN86 165 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 YLPM1P49750 1951 aaKnown RBP9.16□□□□□ -0.94
TNC-201ENST00000341037 TRAV26-2A0A0B4J265 109 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 TNFRSF6BO95407 300 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 FOXL2NBQ6ZUU3 175 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 TMEM75Q8N9X5 138 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 TRBV24-1A0A075B6N3 115 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 VWC2LB2RUY7 222 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 CR1LQ2VPA4 569 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.16□□□□□ -0.94
TNC-201ENST00000341037 CITED2Q99967 270 aaPredicted RBP9.16□□□□□ -0.94
TNC-201ENST00000341037 TP53TG1Q9Y2A0 90 aa9.16□□□□□ -0.94
TNC-201ENST00000341037 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
TNC-201ENST00000341037 SYS1-DBNDD2H3BUS1 97 aa9.15□□□□□ -0.94
TNC-201ENST00000341037 C3orf79P0CE67 100 aa9.15□□□□□ -0.94
TNC-201ENST00000341037 GATA3P23771 443 aa9.15□□□□□ -0.94
TNC-201ENST00000341037 GAGE2AQ6NT46 116 aa9.15□□□□□ -0.94
TNC-201ENST00000341037 CFHR2P36980 270 aa9.15□□□□□ -0.94
TNC-201ENST00000341037 ZNF114Q8NC26 417 aa9.15□□□□□ -0.94
TNC-201ENST00000341037 SRSF8Q9BRL6 282 aaKnown RBP9.15□□□□□ -0.94
TNC-201ENST00000341037 OCIAD2Q56VL3 154 aa9.15□□□□□ -0.94
TNC-201ENST00000341037 LY6G5BQ8NDX9 201 aa9.15□□□□□ -0.95
TNC-201ENST00000341037 ANAPC10Q9UM13 185 aa9.15□□□□□ -0.95
TNC-201ENST00000341037 TCF20Q9UGU0 1960 aaKnown RBP9.15□□□□□ -0.95
TNC-201ENST00000341037 GAGE6Q13070 117 aa9.14□□□□□ -0.95
TNC-201ENST00000341037 PMVKQ15126 192 aa9.14□□□□□ -0.95
TNC-201ENST00000341037 ZNF833PQ6ZTB9 187 aa9.14□□□□□ -0.95
TNC-201ENST00000341037 MRAPQ8TCY5 172 aa9.14□□□□□ -0.95
TNC-201ENST00000341037 TMEM190Q8WZ59 177 aa9.14□□□□□ -0.95
TNC-201ENST00000341037 TRBV25-1A0A075B6N4 114 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms