RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 LCN12Q6JVE5 192 aa10.37□□□□□ -0.75
DNMT1-201ENST00000340748 ZNF833PQ6ZTB9 187 aa10.37□□□□□ -0.75
DNMT1-201ENST00000340748 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
DNMT1-201ENST00000340748 SHANK2-AS3Q9BTD1 123 aa10.37□□□□□ -0.75
DNMT1-201ENST00000340748 MCRIP2Q9BUT9 160 aaKnown RBP10.37□□□□□ -0.75
DNMT1-201ENST00000340748 HOXA3O43365 443 aaPredicted RBP10.37□□□□□ -0.75
DNMT1-201ENST00000340748 TDGF1P3P51864 188 aa10.37□□□□□ -0.75
DNMT1-201ENST00000340748 KLF17Q5JT82 389 aaPredicted RBP10.37□□□□□ -0.75
DNMT1-201ENST00000340748 ORAOV1Q8WV07 137 aa10.37□□□□□ -0.75
DNMT1-201ENST00000340748 ZNF524Q96C55 264 aa10.37□□□□□ -0.75
DNMT1-201ENST00000340748 IGHV4-30-2A0A087WSY4 118 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 CD28P10747 220 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 ADCYAP1P18509 176 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 DMRTA1Q5VZB9 504 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 IGLV3-1P01715 115 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 RNF182Q8N6D2 247 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 TOMM7Q9P0U1 55 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 HSD52Q0P140 79 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 C1orf122Q6ZSJ8 110 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 ANAPC1Q9H1A4 1944 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 H3BUT2 72 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 Q6ZR03 302 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 OR9G4Q8NGQ1 327 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 SPRY4Q9C004 299 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 ADAMTS9Q9P2N4 1935 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 A0A1W2PPI3 338 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 SEC11AP67812 179 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 Q86TA4 180 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 VOPP1Q96AW1 172 aa10.36□□□□□ -0.75
DNMT1-201ENST00000340748 IGLV1-44P01699 117 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 NDUFA4L2Q9NRX3 87 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 KIF26AQ9ULI4 1882 aaPredicted RBP10.35□□□□□ -0.75
DNMT1-201ENST00000340748 SPTBN1Q01082 2364 aaKnown RBP10.35□□□□□ -0.75
DNMT1-201ENST00000340748 KIR3DL3Q8N743 410 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 DPH3P1Q9H4G8 78 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 TRGV4A0A0C4DH28 118 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 UBE2E1P51965 193 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 FAM120AOSQ5T036 256 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 C1orf194Q5T5A4 169 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 TEX36Q5VZQ5 186 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 ZNF562Q6V9R5 426 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 WDR86Q86TI4 376 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 FANCMQ8IYD8 2048 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 COL4A3Q01955 1670 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 LINC00311Q8N616 119 aa10.35□□□□□ -0.75
DNMT1-201ENST00000340748 MRAPQ8TCY5 172 aa10.34□□□□□ -0.75
DNMT1-201ENST00000340748 NHP2Q9NX24 153 aaKnown RBP10.34□□□□□ -0.75
DNMT1-201ENST00000340748 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
DNMT1-201ENST00000340748 OTOGLQ3ZCN5 2332 aa10.34□□□□□ -0.75
DNMT1-201ENST00000340748 ZNF815PA8K554 130 aa10.34□□□□□ -0.75
DNMT1-201ENST00000340748 PAX9P55771 341 aa10.34□□□□□ -0.75
DNMT1-201ENST00000340748 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
DNMT1-201ENST00000340748 ZNF492Q9P255 531 aa10.34□□□□□ -0.75
DNMT1-201ENST00000340748 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
DNMT1-201ENST00000340748 RSPO1Q2MKA7 263 aaPredicted RBP10.34□□□□□ -0.75
DNMT1-201ENST00000340748 NDUFB8O95169 186 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 CFHR2P36980 270 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 YPEL3P61236 119 aaPredicted RBP10.33□□□□□ -0.76
DNMT1-201ENST00000340748 TMEM75Q8N9X5 138 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 RCHY1Q96PM5 261 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 SHISA9B4DS77 424 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 NCR2O95944 276 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 IGHV4-39P01824 125 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 MALP21145 153 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 MLANAQ16655 118 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 ZNF503-AS2A6NEH8 195 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 ZNF415Q09FC8 603 aa10.33□□□□□ -0.76
DNMT1-201ENST00000340748 SRRM4A7MD48 611 aaKnown RBP10.32□□□□□ -0.76
DNMT1-201ENST00000340748 GHRHP01286 108 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 NDPQ00604 133 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 USF3Q68DE3 2245 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 PLNP26678 52 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 DTX2Q86UW9 622 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 IGHV4-61A0A0C4DH41 118 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 TSPAN13O95857 204 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 TMEM256Q8N2U0 113 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 ZMAT4Q9H898 229 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 Q8TAT8 98 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 WFDC12Q8WWY7 111 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 VCYO14598 125 aa10.32□□□□□ -0.76
DNMT1-201ENST00000340748 IGLV3-9A0A075B6K5 115 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
DNMT1-201ENST00000340748 C15orf65H3BRN8 121 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 IGKV1-39P01597 117 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 IGKV1D-39P04432 117 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 PRADC1Q9BSG0 188 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 RHPN1-AS1Q9BWJ2 59 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 LIME1Q9H400 295 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 DAZ1Q9NQZ3 744 aaKnown RBP10.31□□□□□ -0.76
DNMT1-201ENST00000340748 TYMSP04818 313 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 AKAP6Q13023 2319 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 CT83Q5H943 113 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 MRPL52Q86TS9 123 aaKnown RBP10.31□□□□□ -0.76
DNMT1-201ENST00000340748 SELENOKQ9Y6D0 94 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 ZNF688P0C7X2 276 aa10.31□□□□□ -0.76
DNMT1-201ENST00000340748 TRAV8-1A0A0A6YYK1 113 aa10.3□□□□□ -0.76
DNMT1-201ENST00000340748 NOTCH2Q04721 2471 aa10.3□□□□□ -0.76
DNMT1-201ENST00000340748 TRAV2A0A0B4J234 112 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms