RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 C15orf54Q8N8G6 183 aa5.49□□□□□ -1.53
NUP43-201ENST00000340413 ZNF331Q9NQX6 463 aaPredicted RBP5.49□□□□□ -1.53
NUP43-201ENST00000340413 ISLRO14498 428 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 MT-ND4LP03901 98 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 ID1P41134 155 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 RPEL1Q2QD12 228 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 LINC01006Q8NI28 216 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 SMIM7Q9BQ49 75 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 TMPRSS5Q9H3S3 457 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 SOCS3O14543 225 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 LTAP01374 205 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 TCRAP04437 139 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 SAPCD1Q5SSQ6 148 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 MS4A10Q96PG2 267 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 KLK15Q9H2R5 256 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 A8MTW9 85 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 CHEK1O14757 476 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 RPL19P84098 196 aaKnown RBP5.48□□□□□ -1.53
NUP43-201ENST00000340413 MORN5Q5VZ52 161 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 CST9LP1Q5W188 147 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 ISOC2Q96AB3 205 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 SAV1Q9H4B6 383 aaPredicted RBP5.48□□□□□ -1.53
NUP43-201ENST00000340413 RNF114Q9Y508 228 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 APCP25054 2843 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 ITPR3Q14573 2671 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 TNCP24821 2201 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 SH2D7A6NKC9 451 aaPredicted RBP5.48□□□□□ -1.53
NUP43-201ENST00000340413 RPLP1P05386 114 aaKnown RBP5.48□□□□□ -1.53
NUP43-201ENST00000340413 FOLR2P14207 255 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 ATP5G3P48201 142 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 OR8I2Q8N0Y5 310 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 OR1N2Q8NGR9 330 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 CMTM2Q8TAZ6 248 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 GNB4Q9HAV0 340 aa5.48□□□□□ -1.53
NUP43-201ENST00000340413 GCN1Q92616 2671 aaKnown RBP5.47□□□□□ -1.53
NUP43-201ENST00000340413 TRAV5A0A0B4J249 113 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 DIRC3C9JPN6 131 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 RNF212Q495C1 297 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 RASL11AQ6T310 242 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 C9orf47Q6ZRZ4 202 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 APRG1Q8IVJ8 170 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 MLST8Q9BVC4 326 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 GFRA4Q9GZZ7 299 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 GSX1Q9H4S2 264 aaPredicted RBP5.47□□□□□ -1.53
NUP43-201ENST00000340413 SMAD5-AS1Q9Y6J3 95 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 IGHV3-21A0A0B4J1V1 117 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 RPL23P62829 140 aaKnown RBP5.47□□□□□ -1.53
NUP43-201ENST00000340413 LINC01551Q86U37 167 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 TMEM183AQ8IXX5 376 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 APOC3P02656 99 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 PYYP10082 97 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 PSG3Q16557 428 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 GPR61Q9BZJ8 451 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 NRN1Q9NPD7 142 aa5.47□□□□□ -1.53
NUP43-201ENST00000340413 DCHS2Q6V1P9 2916 aa5.46□□□□□ -1.53
NUP43-201ENST00000340413 SCO2A0A1W2PP80 73 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 PGPA6NDG6 321 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 GNG4P50150 75 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 RPS20P60866 119 aaKnown RBP5.46□□□□□ -1.54
NUP43-201ENST00000340413 AWAT1Q58HT5 328 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 LINC00477Q96M19 166 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 YPEL4Q96NS1 127 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 PYGO2Q9BRQ0 406 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 TMEM213A2RRL7 107 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 PPP5D1E7EU14 171 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 NPIPB6E9PJ23 425 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 IGHV3-48P01763 117 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 RPL35P42766 123 aaKnown RBP5.46□□□□□ -1.54
NUP43-201ENST00000340413 UBE2G1P62253 170 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 SUMO1P63165 101 aaKnown RBP5.46□□□□□ -1.54
NUP43-201ENST00000340413 Q86TA4 180 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 C7orf77A4D0Y5 90 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 HOXD3P31249 432 aaPredicted RBP5.46□□□□□ -1.54
NUP43-201ENST00000340413 INSL3P51460 131 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 TCTEX1D4Q5JR98 221 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 Q6AWC8 147 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 IL17RELQ6ZVW7 336 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 DPF1Q92782 380 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 C17orf77Q96MU5 243 aa5.46□□□□□ -1.54
NUP43-201ENST00000340413 TRBV24-1A0A075B6N3 115 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 IGHV4OR15-8A0A075B7B6 117 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 A0A087WW49 117 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 C2orf70A6NJV1 201 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 TYMSP04818 313 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 PAFAH1B2P68402 229 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 DEFA5Q01523 94 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 IQCF2Q8IXL9 164 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 OXLD1Q5BKU9 147 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 DNLZQ5SXM8 178 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 WDR73Q6P4I2 378 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 KCNIP4Q6PIL6 250 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 OR9G4Q8NGQ1 327 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 FAM19A4Q96LR4 140 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 NDFIP1Q9BT67 221 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 RHPN1-AS1Q9BWJ2 59 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 A0A1B0GW15 77 aa5.45□□□□□ -1.54
NUP43-201ENST00000340413 DNASE2O00115 360 aaPredicted RBP5.45□□□□□ -1.54
NUP43-201ENST00000340413 DUSP14O95147 198 aaKnown RBP5.45□□□□□ -1.54
NUP43-201ENST00000340413 IGLV2-8P01709 118 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms