RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 PSMG4Q5JS54 123 aa12.9□□□□□ -0.34
CCNY-202ENST00000339497 NDUFA3O95167 84 aa12.9□□□□□ -0.34
CCNY-202ENST00000339497 RUSC1-AS1Q66K80 236 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 JKAMPQ9P055 326 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 D6R8Y8 96 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 ZNF688P0C7X2 276 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 FXYD7P58549 80 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 CYB5R2Q6BCY4 276 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 GGTLC3B5MD39 225 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 H7C1H1 209 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 SMAGPQ0VAQ4 97 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 TCF15Q12870 199 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 ZNF114Q8NC26 417 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 FAM181BA6NEQ2 426 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 TOMM40O96008 361 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 PPBPP02775 128 aa12.89□□□□□ -0.35
CCNY-202ENST00000339497 MED12LQ86YW9 2145 aa12.88□□□□□ -0.35
CCNY-202ENST00000339497 NDUFB8O95169 186 aa12.88□□□□□ -0.35
CCNY-202ENST00000339497 C10orf91Q5T1B1 145 aa12.88□□□□□ -0.35
CCNY-202ENST00000339497 SHANK2-AS3Q9BTD1 123 aa12.88□□□□□ -0.35
CCNY-202ENST00000339497 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
CCNY-202ENST00000339497 PSG3Q16557 428 aa12.88□□□□□ -0.35
CCNY-202ENST00000339497 DMRTC2Q8IXT2 367 aaPredicted RBP12.88□□□□□ -0.35
CCNY-202ENST00000339497 G3V318 75 aa12.88□□□□□ -0.35
CCNY-202ENST00000339497 NDUFS7O75251 213 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 TTC9CQ8N5M4 171 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 NXT2Q9NPJ8 142 aaKnown RBP12.87□□□□□ -0.35
CCNY-202ENST00000339497 CTSZQ9UBR2 303 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 PLP1P60201 277 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 DEFB104AQ8WTQ1 72 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 F2Z2F3 143 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 ATP6V0E1O15342 81 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 SH2D1AO60880 128 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 MAPK1IP1LQ8NDC0 245 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 IFI27L1Q96BM0 104 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 LINC00311Q8N616 119 aa12.87□□□□□ -0.35
CCNY-202ENST00000339497 OVOL1O14753 267 aa12.86□□□□□ -0.35
CCNY-202ENST00000339497 SUMO2P61956 95 aaKnown RBP12.86□□□□□ -0.35
CCNY-202ENST00000339497 EMP1P54849 157 aa12.86□□□□□ -0.35
CCNY-202ENST00000339497 SAMD13Q5VXD3 122 aa12.86□□□□□ -0.35
CCNY-202ENST00000339497 Q86TA4 180 aa12.86□□□□□ -0.35
CCNY-202ENST00000339497 CHCHD1Q96BP2 118 aaKnown RBP12.86□□□□□ -0.35
CCNY-202ENST00000339497 SLX1AQ9BQ83 275 aa12.86□□□□□ -0.35
CCNY-202ENST00000339497 PEMTQ9UBM1 199 aa12.86□□□□□ -0.35
CCNY-202ENST00000339497 ARHGAP21Q5T5U3 1957 aa12.86□□□□□ -0.35
CCNY-202ENST00000339497 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
CCNY-202ENST00000339497 ZNF418Q8TF45 676 aaPredicted RBP12.86□□□□□ -0.35
CCNY-202ENST00000339497 C3orf79P0CE67 100 aa12.85□□□□□ -0.35
CCNY-202ENST00000339497 TRBV7-1A0A0A6YYK4 115 aa12.85□□□□□ -0.35
CCNY-202ENST00000339497 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
CCNY-202ENST00000339497 LYPD1Q8N2G4 141 aa12.85□□□□□ -0.35
CCNY-202ENST00000339497 EML6Q6ZMW3 1958 aa12.85□□□□□ -0.35
CCNY-202ENST00000339497 UBE2E1P51965 193 aa12.85□□□□□ -0.35
CCNY-202ENST00000339497 ASPHD1Q5U4P2 390 aa12.85□□□□□ -0.35
CCNY-202ENST00000339497 PLA2G2EQ9NZK7 142 aa12.85□□□□□ -0.35
CCNY-202ENST00000339497 PEF1Q9UBV8 284 aaKnown RBP12.85□□□□□ -0.35
CCNY-202ENST00000339497 SMIM13P0DJ93 91 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 DSCR9P59020 149 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 MEIG1Q5JSS6 88 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 ST20Q9HBF5 79 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
CCNY-202ENST00000339497 C22orf46C9J442 243 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 FCN3O75636 299 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 RASL11AQ6T310 242 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 SEM1Q6ZVN7 128 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 SRSF8Q9BRL6 282 aaKnown RBP12.84□□□□□ -0.35
CCNY-202ENST00000339497 MCRIP2Q9BUT9 160 aaKnown RBP12.84□□□□□ -0.35
CCNY-202ENST00000339497 SHISA9B4DS77 424 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 COX6CP09669 75 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 ERCC8Q13216 396 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 AMN1Q8IY45 258 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 JMJD8Q96S16 334 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 FNDC4Q9H6D8 234 aaPredicted RBP12.84□□□□□ -0.35
CCNY-202ENST00000339497 OVOL3O00110 214 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.357e-9■□□□□ 9.3
CCNY-202ENST00000339497 C9orf139Q6ZV77 190 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 SLC25A2Q9BXI2 301 aa12.84□□□□□ -0.35
CCNY-202ENST00000339497 ARMS2P0C7Q2 107 aa12.83□□□□□ -0.36
CCNY-202ENST00000339497 POU2AF1Q16633 256 aa12.83□□□□□ -0.36
CCNY-202ENST00000339497 IGFBPL1Q8WX77 278 aa12.83□□□□□ -0.36
CCNY-202ENST00000339497 KAAG1Q9UBP8 84 aa12.83□□□□□ -0.36
CCNY-202ENST00000339497 DUSP14O95147 198 aaKnown RBP12.83□□□□□ -0.36
CCNY-202ENST00000339497 SMKR1H3BMG3 65 aa12.83□□□□□ -0.36
CCNY-202ENST00000339497 RHPN1-AS1Q9BWJ2 59 aa12.83□□□□□ -0.36
CCNY-202ENST00000339497 NAV2Q8IVL1 2488 aa12.83□□□□□ -0.36
CCNY-202ENST00000339497 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 PCNTO95613 3336 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 TRGV2A0A075B6R0 118 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 APOMO95445 188 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 LHBP01229 141 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 PRR20EP86478 221 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 PRR20CP86479 221 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 PRR20DP86480 221 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 PRR20BP86481 221 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 PRR20AP86496 221 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 C1orf194Q5T5A4 169 aa12.82□□□□□ -0.36
CCNY-202ENST00000339497 ZNF664Q8N3J9 261 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms