RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SHANK2-AS3Q9BTD1 123 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 VPS13CQ709C8 3753 aa12.82□□□□□ -0.36
LITAF-201ENST00000339430 ANKRD17O75179 2603 aaKnown RBP12.82□□□□□ -0.36
LITAF-201ENST00000339430 M0R1W7 72 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 IGLV2-11P01706 119 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 RNASEKQ6P5S7 137 aaKnown RBP12.81□□□□□ -0.36
LITAF-201ENST00000339430 BPIFA4PQ86YQ2 179 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 H3BRN7 92 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 GNG7O60262 68 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 ZFP36P26651 326 aaKnown RBP12.81□□□□□ -0.36
LITAF-201ENST00000339430 HBBP68871 147 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 NDPQ00604 133 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 CLEC2AQ6UVW9 174 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 ATP5L2Q7Z4Y8 100 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 OR4F17Q8NGA8 305 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 C20orf144Q9BQM9 153 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 ZNF492Q9P255 531 aa12.81□□□□□ -0.36
LITAF-201ENST00000339430 TRBV19A0A075B6N1 114 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 HSBP1O75506 76 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 HLA-DRB1P01911 266 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 FOXA3P55318 350 aaPredicted RBP12.8□□□□□ -0.36
LITAF-201ENST00000339430 C10orf105Q8TEF2 133 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 BORCS7Q96B45 105 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 M0R143 59 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 OR2J3O76001 311 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 LMO4P61968 165 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 FANCD2OSQ96PS1 177 aa12.8□□□□□ -0.36
LITAF-201ENST00000339430 M0QZ24 198 aa12.79□□□□□ -0.36
LITAF-201ENST00000339430 IGLC2P0DOY2 106 aa12.79□□□□□ -0.36
LITAF-201ENST00000339430 ATOH7Q8N100 152 aa12.79□□□□□ -0.36
LITAF-201ENST00000339430 ARPC1AQ92747 370 aa12.79□□□□□ -0.36
LITAF-201ENST00000339430 M0R3E3 92 aa12.79□□□□□ -0.36
LITAF-201ENST00000339430 Q56UQ5 140 aa12.79□□□□□ -0.36
LITAF-201ENST00000339430 SIGLEC15Q6ZMC9 328 aa12.79□□□□□ -0.36
LITAF-201ENST00000339430 MIEN1Q9BRT3 115 aa12.79□□□□□ -0.36
LITAF-201ENST00000339430 IGHV4-30-2A0A087WSY4 118 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 M0R2Z0 102 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 NDUFS8O00217 210 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 RAB4AP20338 218 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
LITAF-201ENST00000339430 CT83Q5H943 113 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 LCN12Q6JVE5 192 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
LITAF-201ENST00000339430 ZC2HC1AQ96GY0 325 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 IGLV11-55A0A075B6I3 123 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 NBPF19A0A087WUL8 3843 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 APCP25054 2843 aa12.78□□□□□ -0.36
LITAF-201ENST00000339430 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.36
LITAF-201ENST00000339430 WI2-2373I1.2A0A1W2PRP0 233 aa12.77□□□□□ -0.36
LITAF-201ENST00000339430 ZNF785A8K8V0 405 aa12.77□□□□□ -0.36
LITAF-201ENST00000339430 HOXB4P17483 251 aaPredicted RBP12.77□□□□□ -0.36
LITAF-201ENST00000339430 PMCHL1Q16048 86 aa12.77□□□□□ -0.36
LITAF-201ENST00000339430 SPATA45Q537H7 98 aa12.77□□□□□ -0.36
LITAF-201ENST00000339430 ZNF562Q6V9R5 426 aa12.77□□□□□ -0.36
LITAF-201ENST00000339430 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.36
LITAF-201ENST00000339430 SH2D7A6NKC9 451 aaPredicted RBP12.77□□□□□ -0.37
LITAF-201ENST00000339430 F8W735 103 aaPredicted RBP12.77□□□□□ -0.37
LITAF-201ENST00000339430 MRPS12O15235 138 aaKnown RBP12.77□□□□□ -0.37
LITAF-201ENST00000339430 MFAP4P55083 255 aa12.77□□□□□ -0.37
LITAF-201ENST00000339430 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.37
LITAF-201ENST00000339430 OR4B1Q8NGF8 309 aa12.77□□□□□ -0.37
LITAF-201ENST00000339430 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.37
LITAF-201ENST00000339430 NAV2Q8IVL1 2488 aa12.77□□□□□ -0.37
LITAF-201ENST00000339430 NPIPB6E9PJ23 425 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 NDUFB8O95169 186 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 OR2T8A6NH00 312 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 NPIPB5A8MRT5 1133 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 TMEM11P17152 192 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 MAJINQ3KP22 176 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 GFRA4Q9GZZ7 299 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 LPAR2Q9HBW0 351 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 PSG8Q9UQ74 426 aa12.76□□□□□ -0.37
LITAF-201ENST00000339430 IGHV3OR16-8A0A075B7F1 116 aa12.75□□□□□ -0.37
LITAF-201ENST00000339430 FAM181BA6NEQ2 426 aa12.75□□□□□ -0.37
LITAF-201ENST00000339430 CHEK1O14757 476 aa12.75□□□□□ -0.37
LITAF-201ENST00000339430 CCDC144NLQ6NUI1 221 aa12.75□□□□□ -0.37
LITAF-201ENST00000339430 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
LITAF-201ENST00000339430 TMEM75Q8N9X5 138 aa12.75□□□□□ -0.37
LITAF-201ENST00000339430 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
LITAF-201ENST00000339430 C21orf62Q9NYP8 219 aa12.75□□□□□ -0.37
LITAF-201ENST00000339430 IGHV3-35A0A0C4DH35 117 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 BATFQ16520 125 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 PSG3Q16557 428 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 FASNP49327 2511 aaKnown RBP12.74□□□□□ -0.37
LITAF-201ENST00000339430 TRAV30A0A087WSZ9 112 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 CTRLP40313 264 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 C8orf49Q96NF6 230 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
LITAF-201ENST00000339430 SOX21Q9Y651 276 aaPredicted RBP12.74□□□□□ -0.37
LITAF-201ENST00000339430 K7EQM0 130 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 TCAPO15273 167 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 CRIP1P50238 77 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 DSCR9P59020 149 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 SSTP61278 116 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 Q8N6K4 173 aa12.73□□□□□ -0.37
LITAF-201ENST00000339430 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms