RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 A0A1B0GXF2 115 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 LINC01548A6NM66 108 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 EGR2P11161 476 aaPredicted RBP14.82□□□□□ -0.04
RFTN1-201ENST00000334133 CCDC144NLQ6NUI1 221 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 TEX43Q6ZNM6 134 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 C8orf49Q96NF6 230 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 SIRPDQ9H106 197 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 MUC21A0A0G2JKD1 596 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 MUC21A0A140T8X8 626 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 SAA4P35542 130 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 ZNF138P52744 262 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 MUC21Q5SSG8 566 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 PSG8Q9UQ74 426 aa14.82□□□□□ -0.04
RFTN1-201ENST00000334133 IGHV3OR16-13A0A075B7E8 117 aa14.81□□□□□ -0.04
RFTN1-201ENST00000334133 IGHV3-74A0A0B4J1X5 117 aa14.81□□□□□ -0.04
RFTN1-201ENST00000334133 WI2-2373I1.2A0A1W2PRP0 233 aa14.81□□□□□ -0.04
RFTN1-201ENST00000334133 MAJINQ3KP22 176 aa14.81□□□□□ -0.04
RFTN1-201ENST00000334133 IGHV3-66A0A0C4DH42 116 aa14.81□□□□□ -0.04
RFTN1-201ENST00000334133 MRPS12O15235 138 aaKnown RBP14.81□□□□□ -0.04
RFTN1-201ENST00000334133 HLA-DMBP28068 263 aa14.81□□□□□ -0.04
RFTN1-201ENST00000334133 Q8N6K4 173 aa14.8□□□□□ -0.04
RFTN1-201ENST00000334133 Q8N9W7 124 aa14.8□□□□□ -0.04
RFTN1-201ENST00000334133 ITLN2Q8WWU7 325 aaPredicted RBP14.8□□□□□ -0.04
RFTN1-201ENST00000334133 TIMM8BQ9Y5J9 83 aaPredicted RBP14.8□□□□□ -0.04
RFTN1-201ENST00000334133 ABCA2Q9BZC7 2435 aa14.8□□□□□ -0.04
RFTN1-201ENST00000334133 IGKV2-40A0A087WW87 121 aaPredicted RBP14.8□□□□□ -0.04
RFTN1-201ENST00000334133 NPIPB5A8MRT5 1133 aa14.8□□□□□ -0.04
RFTN1-201ENST00000334133 G3V318 75 aa14.8□□□□□ -0.04
RFTN1-201ENST00000334133 M0R2Z0 102 aa14.8□□□□□ -0.04
RFTN1-201ENST00000334133 IGKV2D-40P01614 121 aaPredicted RBP14.8□□□□□ -0.04
RFTN1-201ENST00000334133 CRIP1P50238 77 aa14.8□□□□□ -0.04
RFTN1-201ENST00000334133 RBPMS2Q6ZRY4 209 aaKnown RBP14.8□□□□□ -0.04
RFTN1-201ENST00000334133 CLEC5AQ9NY25 188 aa14.8□□□□□ -0.04
RFTN1-201ENST00000334133 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.8□□□□□ -0.04
RFTN1-201ENST00000334133 GPR183P32249 361 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 RASL11AQ6T310 242 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 TTC9CQ8N5M4 171 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 BORCS7Q96B45 105 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 ZNF492Q9P255 531 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 CENPEQ02224 2701 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 CTSGP08311 255 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 URB1-AS1Q96HZ7 61 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 LINC00527Q9UJ94 153 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 IGHV2-70DA0A0C4DH43 119 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 UNQ5815/PRO19632Q6UWF5 114 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 TMEM219Q86XT9 240 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 SMIM12Q96EX1 92 aa14.79□□□□□ -0.04
RFTN1-201ENST00000334133 CHEK1O14757 476 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 ARMS2P0C7Q2 107 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 EFNA4P52798 201 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 BATFQ16520 125 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 Q8TAT8 98 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 C1RLQ9NZP8 487 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 USP9XQ93008 2570 aaPredicted RBP14.78□□□□□ -0.04
RFTN1-201ENST00000334133 IGHV3-49A0A0A0MS15 119 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 ATP6V0E1O15342 81 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 CSN3P07498 182 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 PSG3Q16557 428 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 AJUBAQ96IF1 538 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 ZFYVE26Q68DK2 2539 aa14.78□□□□□ -0.04
RFTN1-201ENST00000334133 CACNA1AO00555 2505 aa14.77□□□□□ -0.04
RFTN1-201ENST00000334133 MYO18BQ8IUG5 2567 aa14.77□□□□□ -0.04
RFTN1-201ENST00000334133 FAM106CPP0CH98 169 aa14.77□□□□□ -0.04
RFTN1-201ENST00000334133 LMO4P61968 165 aa14.77□□□□□ -0.04
RFTN1-201ENST00000334133 ATP5L2Q7Z4Y8 100 aa14.77□□□□□ -0.04
RFTN1-201ENST00000334133 C15orf32Q32M92 178 aa14.77□□□□□ -0.05
RFTN1-201ENST00000334133 EBLN2Q6P2I7 272 aa14.77□□□□□ -0.05
RFTN1-201ENST00000334133 C1orf122Q6ZSJ8 110 aa14.77□□□□□ -0.05
RFTN1-201ENST00000334133 MINOS1Q5TGZ0 78 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 AAMDCQ9H7C9 122 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 THYN1Q9P016 225 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 MINOS1-NBL1R4GNA1 71 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 IGSF10Q6WRI0 2623 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 TRAV30A0A087WSZ9 112 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 C2orf88Q9BSF0 95 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 NPIPB6E9PJ23 425 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 SPATA45Q537H7 98 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 LINC00173Q6ZV60 143 aa14.76□□□□□ -0.05
RFTN1-201ENST00000334133 ACACBO00763 2458 aa14.75□□□□□ -0.05
RFTN1-201ENST00000334133 K7EQM0 130 aa14.75□□□□□ -0.05
RFTN1-201ENST00000334133 ZNF207O43670 478 aaKnown RBP14.75□□□□□ -0.05
RFTN1-201ENST00000334133 CLEC3BP05452 202 aa14.75□□□□□ -0.05
RFTN1-201ENST00000334133 FAM181BA6NEQ2 426 aa14.75□□□□□ -0.05
RFTN1-201ENST00000334133 CT83Q5H943 113 aa14.75□□□□□ -0.05
RFTN1-201ENST00000334133 BRD3OSQ6XYD6 125 aa14.75□□□□□ -0.05
RFTN1-201ENST00000334133 TMEM75Q8N9X5 138 aa14.75□□□□□ -0.05
RFTN1-201ENST00000334133 RHOGP84095 191 aa14.74□□□□□ -0.05
RFTN1-201ENST00000334133 EBI3Q14213 229 aa14.74□□□□□ -0.05
RFTN1-201ENST00000334133 MCRIP2Q9BUT9 160 aaKnown RBP14.74□□□□□ -0.05
RFTN1-201ENST00000334133 SMAD5-AS1Q9Y6J3 95 aa14.74□□□□□ -0.05
RFTN1-201ENST00000334133 CSPG4Q6UVK1 2322 aa14.74□□□□□ -0.05
RFTN1-201ENST00000334133 UBE2E1P51965 193 aa14.74□□□□□ -0.05
RFTN1-201ENST00000334133 KLF5Q13887 457 aaPredicted RBP14.74□□□□□ -0.05
RFTN1-201ENST00000334133 SPATA12Q7Z6I5 190 aa14.74□□□□□ -0.05
RFTN1-201ENST00000334133 C20orf144Q9BQM9 153 aa14.74□□□□□ -0.05
RFTN1-201ENST00000334133 MIEN1Q9BRT3 115 aa14.74□□□□□ -0.05
RFTN1-201ENST00000334133 SOX21Q9Y651 276 aaPredicted RBP14.74□□□□□ -0.05
RFTN1-201ENST00000334133 M0R143 59 aa14.73□□□□□ -0.05
RFTN1-201ENST00000334133 OVOL3O00110 214 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms