RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 ZC2HC1AQ96GY0 325 aa11.62□□□□□ -0.55
CLCNKA-201ENST00000331433 ATP5L2Q7Z4Y8 100 aa11.61□□□□□ -0.55
CLCNKA-201ENST00000331433 ATP6V0E1O15342 81 aa11.61□□□□□ -0.55
CLCNKA-201ENST00000331433 HBBP68871 147 aa11.61□□□□□ -0.55
CLCNKA-201ENST00000331433 TDRG1Q3Y452 100 aa11.61□□□□□ -0.55
CLCNKA-201ENST00000331433 UNQ5815/PRO19632Q6UWF5 114 aa11.61□□□□□ -0.55
CLCNKA-201ENST00000331433 FAM19A2Q8N3H0 131 aa11.61□□□□□ -0.55
CLCNKA-201ENST00000331433 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
CLCNKA-201ENST00000331433 IGHV3OR16-10A0A075B7F0 116 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 DIRC3C9JPN6 131 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 LYPD1Q8N2G4 141 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 VN1R17PQ8TDU5 208 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 NRN1Q9NPD7 142 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 PSG8Q9UQ74 426 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 LINC01548A6NM66 108 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 NPFFO15130 113 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 ZNF324O75467 553 aaPredicted RBP11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 KRTDAPP60985 99 aa11.6□□□□□ -0.55
CLCNKA-201ENST00000331433 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 CENPVL3A0A0U1RRI6 287 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 PSG3Q16557 428 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 C15orf32Q32M92 178 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 ALKBH7Q9BT30 221 aaPredicted RBP11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 G3V318 75 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 K7EQM0 130 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 NTF3P20783 257 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 GPR183P32249 361 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 S100A7AQ86SG5 101 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 NDUFAF3Q9BU61 184 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 GFRA4Q9GZZ7 299 aa11.59□□□□□ -0.55
CLCNKA-201ENST00000331433 TRBV6-1A0A0K0K1D8 114 aa11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 AAMDCQ9H7C9 122 aa11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 CRYBG3Q68DQ2 2970 aa11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 RHOGP84095 191 aa11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 PDE6HQ13956 83 aa11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 TMEM219Q86XT9 240 aa11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 ZFP30Q9Y2G7 519 aa11.58□□□□□ -0.56
CLCNKA-201ENST00000331433 KIR2DL5BA0A0G2JN68 375 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 KIR2DL5BA0A0G2JPC4 375 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 CRIP1P50238 77 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 FOXA3P55318 350 aaPredicted RBP11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 TEX43Q6ZNM6 134 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 NIT1Q86X76 327 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 KIR2DL5AQ8N109 375 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 ZNF502Q8TBZ5 544 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 C8orf49Q96NF6 230 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 RABAC1Q9UI14 185 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 DOPEY1Q5JWR5 2465 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 IGFL4Q6B9Z1 124 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 C16orf54Q6UWD8 224 aa11.57□□□□□ -0.56
CLCNKA-201ENST00000331433 IGHV4-61A0A0C4DH41 118 aa11.56□□□□□ -0.56
CLCNKA-201ENST00000331433 CLEC3BP05452 202 aa11.56□□□□□ -0.56
CLCNKA-201ENST00000331433 RPL7P18124 248 aaKnown RBP11.56□□□□□ -0.56
CLCNKA-201ENST00000331433 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
CLCNKA-201ENST00000331433 OR4B1Q8NGF8 309 aa11.56□□□□□ -0.56
CLCNKA-201ENST00000331433 SOX21Q9Y651 276 aaPredicted RBP11.56□□□□□ -0.56
CLCNKA-201ENST00000331433 SMAD5-AS1Q9Y6J3 95 aa11.56□□□□□ -0.56
CLCNKA-201ENST00000331433 UTP20O75691 2785 aaKnown RBP11.56□□□□□ -0.56
CLCNKA-201ENST00000331433 IGKV2-40A0A087WW87 121 aaPredicted RBP11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 SCGB2A1O75556 95 aa11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 IGKV2D-40P01614 121 aaPredicted RBP11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 RNASEKQ6P5S7 137 aaKnown RBP11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 BRD3OSQ6XYD6 125 aa11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 Q8N976 141 aa11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 TXN2Q99757 166 aa11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 PAM16Q9Y3D7 125 aa11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 MYO18BQ8IUG5 2567 aa11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 FAM231BA6NCW3 169 aa11.55□□□□□ -0.56
CLCNKA-201ENST00000331433 M0QZ24 198 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 APOHP02749 345 aaPredicted RBP11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 HLA-DMBP28068 263 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 CSN1S1P47710 185 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 TMEM190Q8WZ59 177 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 CCL19Q99731 98 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 HSBP1O75506 76 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 C3orf79P0CE67 100 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 PSG9Q00887 426 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 PAX8Q06710 450 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 C5orf56Q8N8D9 126 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 CSMD2Q7Z408 3487 aa11.54□□□□□ -0.56
CLCNKA-201ENST00000331433 CHEK1O14757 476 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 ARMS2P0C7Q2 107 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 CLEC19AQ6UXS0 136 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 LURAP1LQ8IV03 231 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 TPPP3Q9BW30 176 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 LINC00527Q9UJ94 153 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 TRAV40A0A0B4J280 105 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 PIMREGQ9BSJ6 248 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 VAMP8Q9BV40 100 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 ZFAND3Q9H8U3 227 aa11.53□□□□□ -0.56
CLCNKA-201ENST00000331433 IGHV3-66A0A0C4DH42 116 aa11.52□□□□□ -0.56
CLCNKA-201ENST00000331433 HAX1O00165 279 aa11.52□□□□□ -0.56
CLCNKA-201ENST00000331433 CT45A10P0DMU9 189 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms