RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
PGBD2-201ENST00000329291 CIARTQ8N365 385 aaPredicted RBP12.28□□□□□ -0.44
PGBD2-201ENST00000329291 GNB4Q9HAV0 340 aa12.28□□□□□ -0.44
PGBD2-201ENST00000329291 RNF24Q9Y225 148 aa12.28□□□□□ -0.44
PGBD2-201ENST00000329291 TEX15Q9BXT5 2789 aa12.27□□□□□ -0.45
PGBD2-201ENST00000329291 S100A9P06702 114 aaKnown RBP12.27□□□□□ -0.45
PGBD2-201ENST00000329291 IGFL4Q6B9Z1 124 aa12.27□□□□□ -0.45
PGBD2-201ENST00000329291 Q86TA4 180 aa12.27□□□□□ -0.45
PGBD2-201ENST00000329291 GAR1Q9NY12 217 aaKnown RBP12.27□□□□□ -0.45
PGBD2-201ENST00000329291 PCP4L1A6NKN8 68 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 IGHG2P01859 326 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 IGF1P05019 195 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 FABP4P15090 132 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 ATP5G2Q06055 141 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 COA6Q5JTJ3 125 aaKnown RBP12.26□□□□□ -0.45
PGBD2-201ENST00000329291 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 LYPD1Q8N2G4 141 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 OR10D4PQ8NGN7 298 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 EEF1AKMT3Q96AZ1 226 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 MRPL18Q9H0U6 180 aaKnown RBP12.26□□□□□ -0.45
PGBD2-201ENST00000329291 ZNF469Q96JG9 3925 aaPredicted RBP12.26□□□□□ -0.45
PGBD2-201ENST00000329291 IGHV3-66A0A0C4DH42 116 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 APOHP02749 345 aaPredicted RBP12.26□□□□□ -0.45
PGBD2-201ENST00000329291 DEFB112Q30KQ8 113 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 HIST2H2BCQ6DN03 193 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 MRPL54Q6P161 138 aaKnown RBP12.26□□□□□ -0.45
PGBD2-201ENST00000329291 S100A7AQ86SG5 101 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 GRAMD2BQ96HH9 432 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 HIST1H2BLQ99880 126 aa12.26□□□□□ -0.45
PGBD2-201ENST00000329291 TRBV7-1A0A0A6YYK4 115 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 C19orf71A6NCJ1 209 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 DIRC3C9JPN6 131 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 BMPR1BO00238 502 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 TRGV3P03979 118 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
PGBD2-201ENST00000329291 PRSS22Q9GZN4 317 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 IGHV3OR16-13A0A075B7E8 117 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 IGHV3-74A0A0B4J1X5 117 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 SNURFLB1AK76 121 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 ZNF207O43670 478 aaKnown RBP12.25□□□□□ -0.45
PGBD2-201ENST00000329291 IGHV4-59P01825 116 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 IGHG4P01861 327 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 SMIM6P0DI80 62 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 HLA-DMBP28068 263 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 TMEM136Q6ZRR5 245 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 NUP35Q8NFH5 326 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 SMIM12Q96EX1 92 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 KLK15Q9H2R5 256 aa12.25□□□□□ -0.45
PGBD2-201ENST00000329291 GRIFINA4D1Z8 144 aa12.24□□□□□ -0.45
PGBD2-201ENST00000329291 IZUMO1RA6ND01 250 aa12.24□□□□□ -0.45
PGBD2-201ENST00000329291 NUPR1O60356 82 aa12.24□□□□□ -0.45
PGBD2-201ENST00000329291 TRBV12-3P01733 135 aa12.24□□□□□ -0.45
PGBD2-201ENST00000329291 RPL7P18124 248 aaKnown RBP12.24□□□□□ -0.45
PGBD2-201ENST00000329291 PDE6HQ13956 83 aa12.24□□□□□ -0.45
PGBD2-201ENST00000329291 CYB5R2Q6BCY4 276 aa12.24□□□□□ -0.45
PGBD2-201ENST00000329291 LCNL1Q6ZST4 164 aa12.24□□□□□ -0.45
PGBD2-201ENST00000329291 KRTAP1-3Q8IUG1 177 aa12.24□□□□□ -0.45
PGBD2-201ENST00000329291 IGHV3-49A0A0A0MS15 119 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 BUB3O43684 328 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 S100A2P29034 98 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 PYY3Q5JQD4 70 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 TMEM256Q8N2U0 113 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 NEU1Q99519 415 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 GNB1LQ9BYB4 327 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 PSG8Q9UQ74 426 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 AMBPP02760 352 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 PSG3Q16557 428 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 GDF5OSQ5U4N7 250 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 CDPF1Q6NVV7 123 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 TMEM75Q8N9X5 138 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 TSKUQ8WUA8 353 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 ZC2HC1AQ96GY0 325 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 ZNF492Q9P255 531 aa12.23□□□□□ -0.45
PGBD2-201ENST00000329291 TRBV6-1A0A0K0K1D8 114 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 FAM223BA6NKX1 122 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 TPPP2P59282 170 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 TCF24Q7RTU0 167 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 FAM223AQ8IWN6 122 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 GTSF1Q8WW33 167 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 HIGD1CA8MV81 97 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 ZNF705FA8MVS1 300 aaPredicted RBP12.22□□□□□ -0.45
PGBD2-201ENST00000329291 CRIP1P50238 77 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 TMEM95Q3KNT9 176 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 RPP21Q9H633 154 aaKnown RBP12.22□□□□□ -0.45
PGBD2-201ENST00000329291 NIT2Q9NQR4 276 aa12.22□□□□□ -0.45
PGBD2-201ENST00000329291 IGKV2-40A0A087WW87 121 aaPredicted RBP12.21□□□□□ -0.45
PGBD2-201ENST00000329291 FSHBP01225 129 aa12.21□□□□□ -0.45
PGBD2-201ENST00000329291 IGKV2D-40P01614 121 aaPredicted RBP12.21□□□□□ -0.45
PGBD2-201ENST00000329291 PRR31Q5SQ13 230 aa12.21□□□□□ -0.45
PGBD2-201ENST00000329291 AAMDCQ9H7C9 122 aa12.21□□□□□ -0.45
PGBD2-201ENST00000329291 NAT8BQ9UHF3 227 aa12.21□□□□□ -0.45
PGBD2-201ENST00000329291 CR1P17927 2039 aa12.21□□□□□ -0.46
PGBD2-201ENST00000329291 F2Z2F3 143 aa12.2□□□□□ -0.46
PGBD2-201ENST00000329291 P01737 135 aa12.2□□□□□ -0.46
PGBD2-201ENST00000329291 IGHV3-11P01762 117 aa12.2□□□□□ -0.46
PGBD2-201ENST00000329291 GZMBP10144 247 aa12.2□□□□□ -0.46
PGBD2-201ENST00000329291 RAB4BP61018 213 aa12.2□□□□□ -0.46
PGBD2-201ENST00000329291 PSG9Q00887 426 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms