RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.12□□□□□ -0.79
CCDC60-201ENST00000327554 TNFRSF1AP19438 455 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 LYZL1Q6UWQ5 148 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 RITA1Q96K30 269 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 ZMAT4Q9H898 229 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 NHP2Q9NX24 153 aaKnown RBP10.12□□□□□ -0.79
CCDC60-201ENST00000327554 RNF7Q9UBF6 113 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 PSG8Q9UQ74 426 aa10.12□□□□□ -0.79
CCDC60-201ENST00000327554 CACNA1GO43497 2377 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 TM2D2Q9BX73 214 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 SLC25A39Q9BZJ4 359 aaPredicted RBP10.11□□□□□ -0.79
CCDC60-201ENST00000327554 C16orf97H3BN30 126 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 J3QR89 54 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 SLC25A17O43808 307 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 NPYP01303 97 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 IGFBP4P22692 258 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 GATA4P43694 442 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 CKS1BP61024 79 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 ZNF562Q6V9R5 426 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 SH2D6Q7Z4S9 175 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 C9orf106Q8NAJ2 232 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
CCDC60-201ENST00000327554 TRBV25-1A0A075B6N4 114 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 IGLL5B9A064 214 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 SMKR1H3BMG3 65 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 LYZP61626 148 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 ODF1Q14990 250 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 TCTEX1D4Q5JR98 221 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 CEND1Q8N111 149 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 ARPC1AQ92747 370 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 LINC00312Q9Y6C7 94 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 VSTM5A8MXK1 200 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 SHISA9B4DS77 424 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 K7EMI3 77 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
CCDC60-201ENST00000327554 TRBV19A0A075B6N1 114 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 CCL3L1P16619 93 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 SCGB2A2Q13296 93 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 SIGLEC15Q6ZMC9 328 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 C8orf49Q96NF6 230 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 A0A1W2PNU3 283 aaPredicted RBP10.09□□□□□ -0.79
CCDC60-201ENST00000327554 H3BMG7 143 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 APELAP0DMC3 54 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 PSMG4Q5JS54 123 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 MAFAQ8NHW3 353 aaPredicted RBP10.09□□□□□ -0.79
CCDC60-201ENST00000327554 SLC25A15Q9Y619 301 aa10.09□□□□□ -0.79
CCDC60-201ENST00000327554 ICE1Q9Y2F5 2266 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 TMSB15BA0A087X1C1 80 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 VMA21Q3ZAQ7 101 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 PRO0461Q9UI25 63 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 SH3BGRL2Q9UJC5 107 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 AGRNO00468 2067 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 TRAV26-1A0A087WT03 109 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 THBDP07204 575 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 CKS2P33552 79 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 ZNF479Q96JC4 524 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 NGBQ9NPG2 151 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 SIT1Q9Y3P8 196 aa10.08□□□□□ -0.8
CCDC60-201ENST00000327554 EVI2AP22794 236 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 INSL3P51460 131 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 FAM169BQ8N8A8 192 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 IGLV3-9A0A075B6K5 115 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 LINC01546A6NGU7 62 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 K7EQM0 130 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 ATP5G2Q06055 141 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 SRSF1Q07955 248 aaKnown RBP eCLIP10.07□□□□□ -0.8
CCDC60-201ENST00000327554 ZNF502Q8TBZ5 544 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 TMEM190Q8WZ59 177 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 FER1L6-AS2Q96M78 137 aa10.07□□□□□ -0.8
CCDC60-201ENST00000327554 ABCA1O95477 2261 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 FCN3O75636 299 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 IGHG3P01860 377 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 GLRXP35754 106 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 CRYBA4P53673 196 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 GTSCR1Q86UQ5 136 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 MRAP2Q96G30 205 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 NPIPB5A8MRT5 1133 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 M0R3E3 92 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 SH2D1AO60880 128 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 IGHV1-46P01743 117 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 IGKCP01834 107 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 HLA-DRB4P13762 266 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 RPL27AP46776 148 aaKnown RBP10.06□□□□□ -0.8
CCDC60-201ENST00000327554 TNFAIP6P98066 277 aaPredicted RBP10.06□□□□□ -0.8
CCDC60-201ENST00000327554 C12orf74Q32Q52 190 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 AMTNQ6UX39 209 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 TMEM178AQ8NBL3 297 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 HLA-DRB4X5D2U9 266 aa10.06□□□□□ -0.8
CCDC60-201ENST00000327554 M0R1B8 84 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 TEX36Q5VZQ5 186 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 LYPD1Q8N2G4 141 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 MTURNQ8N3F0 131 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 SHANK2-AS3Q9BTD1 123 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 SCNM1Q9BWG6 230 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 K7EM74 188 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 FCER1GP30273 86 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 LEPP41159 167 aa10.05□□□□□ -0.8
CCDC60-201ENST00000327554 CCL11P51671 97 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms