RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 OR2T8A6NH00 312 aa10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 CCL21O00585 134 aa10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 IGKV1-17P01599 117 aa10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 LIPFP07098 398 aa10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 WIPF2Q8TF74 440 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 C8orf49Q96NF6 230 aa10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 LTAP01374 205 aa10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 ORM1P02763 201 aa10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 ECSCRQ19T08 205 aa10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 BCL6BQ8N143 479 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-201ENST00000325110 TMEM189A5PLL7 270 aa10.22□□□□□ -0.77
HMGCS1-201ENST00000325110 C2orf70A6NJV1 201 aa10.22□□□□□ -0.77
HMGCS1-201ENST00000325110 FAM71F2Q6NXP2 309 aa10.22□□□□□ -0.77
HMGCS1-201ENST00000325110 DPM3Q9P2X0 92 aa10.22□□□□□ -0.77
HMGCS1-201ENST00000325110 HSPB8Q9UJY1 196 aa10.22□□□□□ -0.77
HMGCS1-201ENST00000325110 A0A087X0K7 114 aa10.22□□□□□ -0.77
HMGCS1-201ENST00000325110 TEX22C9J3V5 150 aa10.22□□□□□ -0.77
HMGCS1-201ENST00000325110 NBR2O15453 112 aa10.22□□□□□ -0.77
HMGCS1-201ENST00000325110 TMEM213A2RRL7 107 aa10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 PPIFP30405 207 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 DLX6P56179 175 aa10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 Q8NA96 180 aa10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 ZNF785A8K8V0 405 aa10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 SMKR1H3BMG3 65 aa10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 NCR2O95944 276 aa10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 RELQ04864 619 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 C18orf15Q96N68 181 aa10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 AP1S3Q96PC3 154 aa10.21□□□□□ -0.77
HMGCS1-201ENST00000325110 J3KRW8 73 aa10.21□□□□□ -0.78
HMGCS1-201ENST00000325110 IGLV1-47P01700 117 aa10.21□□□□□ -0.78
HMGCS1-201ENST00000325110 CRYGCP07315 174 aa10.21□□□□□ -0.78
HMGCS1-201ENST00000325110 TWIST1Q15672 202 aa10.21□□□□□ -0.78
HMGCS1-201ENST00000325110 MLST8Q9BVC4 326 aa10.21□□□□□ -0.78
HMGCS1-201ENST00000325110 ZZEF1O43149 2961 aa10.21□□□□□ -0.78
HMGCS1-201ENST00000325110 A0A1B0GXF2 115 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 NPIPB5A8MRT5 1133 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 CEACAM3P40198 252 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 MYCNOSP40205 109 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 AMN1Q8IY45 258 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 CBY1Q9Y3M2 126 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 TRBV19A0A075B6N1 114 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 D6R8Y8 96 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 ZNF207O43670 478 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 NDUFB8O95169 186 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 FSTL3O95633 263 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 KLF5Q13887 457 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 URB1-AS1Q96HZ7 61 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 KAAG1Q9UBP8 84 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 KLF12Q9Y4X4 402 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 INS-IGF2F8WCM5 200 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 MFAP4P55083 255 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 LYZL1Q6UWQ5 148 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 RAB1BQ9H0U4 201 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 C7orf69Q9H7B7 122 aa10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 SOX21Q9Y651 276 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-201ENST00000325110 IFI27P40305 119 aaPredicted RBP10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 C19orf71A6NCJ1 209 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 I3L2K1 104 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 K7EIM0 57 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 CKS2P33552 79 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 PCP4P48539 62 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 OR10AG1Q8NH19 301 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 CHCHD1Q96BP2 118 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 NAA38Q9BRA0 125 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 SHANK2-AS3Q9BTD1 123 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 C21orf62Q9NYP8 219 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 ZNF492Q9P255 531 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 ASH1LQ9NR48 2969 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 LOC105371242A0A075B767 164 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 CCL25O15444 150 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 MRGPRG-AS1Q2M3A8 158 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 MRPL52Q86TS9 123 aaKnown RBP10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 ZNF491Q8N8L2 437 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 TNFRSF14Q92956 283 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 PRELID3AQ96N28 172 aa10.19□□□□□ -0.78
HMGCS1-201ENST00000325110 CSPG4Q6UVK1 2322 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 NMUP48645 174 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 TMEM75Q8N9X5 138 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 GPR183P32249 361 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 PSG3Q16557 428 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 S100A7AQ86SG5 101 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 ARPC1AQ92747 370 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 PRSS22Q9GZN4 317 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 COX11Q9Y6N1 276 aa10.18□□□□□ -0.78
HMGCS1-201ENST00000325110 TM4SF20Q53R12 229 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 FBLN7Q53RD9 439 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 LDLRAD2Q5SZI1 272 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 FAM120AOSQ5T036 256 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 MRPS16Q9Y3D3 137 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 GAGE1Q13065 139 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 FAM106AQ4KMX7 169 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 THYN1Q9P016 225 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 CSMD1Q96PZ7 3565 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 CT83Q5H943 113 aa10.17□□□□□ -0.78
HMGCS1-201ENST00000325110 CACNG7P62955 275 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 PVRIGQ6DKI7 326 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 SIGLEC15Q6ZMC9 328 aa10.16□□□□□ -0.78
HMGCS1-201ENST00000325110 ST20Q9HBF5 79 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms