RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 CITED4Q96RK1 184 aa11.53□□□□□ -0.56
PRPF3-201ENST00000324862 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 A0A1W2PS18 150 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 BCL2P10415 239 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 ICAM4Q14773 271 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 C1orf194Q5T5A4 169 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 WFDC3Q8IUB2 231 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 SUN5Q8TC36 379 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 TMEM167BQ9NRX6 74 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 DNHD1Q96M86 4753 aa11.52□□□□□ -0.56
PRPF3-201ENST00000324862 IZUMO1RA6ND01 250 aa11.52□□□□□ -0.57
PRPF3-201ENST00000324862 ATF4P18848 351 aaPredicted RBP11.52□□□□□ -0.57
PRPF3-201ENST00000324862 S100A7AQ86SG5 101 aa11.52□□□□□ -0.57
PRPF3-201ENST00000324862 RNF182Q8N6D2 247 aa11.52□□□□□ -0.57
PRPF3-201ENST00000324862 LOC102723971A0A1B0GUV8 181 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 M0R3E3 92 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 SAP30O75446 220 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 GALR1P47211 349 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 CD81P60033 236 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
PRPF3-201ENST00000324862 FAM90A2PQ658T7 463 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 DEFB1P60022 68 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 TMEM61Q8N0U2 210 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 GRAMD2BQ96HH9 432 aa11.51□□□□□ -0.57
PRPF3-201ENST00000324862 C11orf94C9JXX5 98 aa11.5□□□□□ -0.57
PRPF3-201ENST00000324862 GNG5P63218 68 aa11.5□□□□□ -0.57
PRPF3-201ENST00000324862 CD300EQ496F6 205 aaPredicted RBP11.5□□□□□ -0.57
PRPF3-201ENST00000324862 FAM24BQ8N5W8 94 aa11.5□□□□□ -0.57
PRPF3-201ENST00000324862 Q9H3A6 140 aa11.5□□□□□ -0.57
PRPF3-201ENST00000324862 CEBPGP53567 150 aa11.5□□□□□ -0.57
PRPF3-201ENST00000324862 RPH3ALQ9UNE2 315 aa11.5□□□□□ -0.57
PRPF3-201ENST00000324862 TRAV8-2A0A0B4J237 113 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 PGPA6NDG6 321 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
PRPF3-201ENST00000324862 MEF2BQ02080 365 aaPredicted RBP11.49□□□□□ -0.57
PRPF3-201ENST00000324862 DEFB114Q30KQ6 69 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 DYNLRB2Q8TF09 96 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 MS4A6AQ9H2W1 248 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 M0QZ24 198 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 ZNF506Q5JVG8 444 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 SHISA2Q6UWI4 295 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 SGK494Q96LW2 274 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 TREM1Q9NP99 234 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 MANBALQ9NQG1 85 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 MED9Q9NWA0 146 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 SORL1Q92673 2214 aa11.49□□□□□ -0.57
PRPF3-201ENST00000324862 CD5P06127 495 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 S100A7P31151 101 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 C20orf173Q96LM9 149 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 GPR82Q96P67 336 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
PRPF3-201ENST00000324862 VAX2Q9UIW0 290 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 SCO2A0A1W2PP80 73 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 PPT1P50897 306 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 CCDC28AQ8IWP9 274 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 DCANP1Q8TF63 244 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 LINC00479Q96M42 142 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
PRPF3-201ENST00000324862 A0A087X0K7 114 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 SOCS3O14543 225 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 IFNA1P01562 189 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 CYB561D1Q8N8Q1 229 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 C16orf92Q96LL3 132 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 ASCL2Q99929 193 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 RAB19A4D1S5 217 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 HELTA6NFD8 242 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 PMS2P11Q13670 270 aa11.47□□□□□ -0.57
PRPF3-201ENST00000324862 PRAC2D3DTV9 90 aa11.46□□□□□ -0.58
PRPF3-201ENST00000324862 SLC25A5P05141 298 aaKnown RBP11.46□□□□□ -0.58
PRPF3-201ENST00000324862 SRP19P09132 144 aaKnown RBP11.46□□□□□ -0.58
PRPF3-201ENST00000324862 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.58
PRPF3-201ENST00000324862 LINC00052Q96N35 136 aa11.46□□□□□ -0.58
PRPF3-201ENST00000324862 RNF24Q9Y225 148 aa11.46□□□□□ -0.58
PRPF3-201ENST00000324862 ZNF688P0C7X2 276 aa11.45□□□□□ -0.58
PRPF3-201ENST00000324862 ZNF705DP0CH99 300 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-201ENST00000324862 ZNF705BP0CI00 300 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-201ENST00000324862 PDE6HQ13956 83 aa11.45□□□□□ -0.58
PRPF3-201ENST00000324862 TRAV8-1A0A0A6YYK1 113 aa11.45□□□□□ -0.58
PRPF3-201ENST00000324862 DNASE2O00115 360 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-201ENST00000324862 IGLL1P15814 213 aa11.45□□□□□ -0.58
PRPF3-201ENST00000324862 CD33P20138 364 aa11.45□□□□□ -0.58
PRPF3-201ENST00000324862 BMI1P35226 326 aa11.45□□□□□ -0.58
PRPF3-201ENST00000324862 TRAV34A0A0B4J273 112 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 F6UB75 175 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 ADCYAP1P18509 176 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 PEA15Q15121 130 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 ZNF124Q15973 351 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
PRPF3-201ENST00000324862 OTORQ9NRC9 128 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 IGLV1-51P01701 117 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 SFTA3P0C7M3 94 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 GUCA2BQ16661 112 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 EIF4E3Q8N5X7 224 aaKnown RBP11.44□□□□□ -0.58
PRPF3-201ENST00000324862 AAMDCQ9H7C9 122 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 SIGLEC8Q9NYZ4 499 aa11.44□□□□□ -0.58
PRPF3-201ENST00000324862 IGKV2-40A0A087WW87 121 aaPredicted RBP11.43□□□□□ -0.58
PRPF3-201ENST00000324862 K7EQG2 157 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms