RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 GAGE12BA1L429 117 aa10.52□□□□□ -0.73
NBPF3-201ENST00000318220 C15orf65H3BRN8 121 aa10.52□□□□□ -0.73
NBPF3-201ENST00000318220 GAGE7O76087 117 aa10.52□□□□□ -0.73
NBPF3-201ENST00000318220 GAGE12FP0CL80 117 aa10.52□□□□□ -0.73
NBPF3-201ENST00000318220 GAGE12GP0CL81 117 aa10.52□□□□□ -0.73
NBPF3-201ENST00000318220 GAGE12IP0CL82 117 aa10.52□□□□□ -0.73
NBPF3-201ENST00000318220 RPL29P47914 159 aaKnown RBP10.52□□□□□ -0.73
NBPF3-201ENST00000318220 QRFPP83859 136 aa10.52□□□□□ -0.73
NBPF3-201ENST00000318220 SMAD5-AS1Q9Y6J3 95 aa10.52□□□□□ -0.73
NBPF3-201ENST00000318220 C7orf77A4D0Y5 90 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 TMEM50AO95807 157 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 EIF4E3Q8N5X7 224 aaKnown RBP10.51□□□□□ -0.73
NBPF3-201ENST00000318220 MAP1AP78559 2803 aaPredicted RBP10.51□□□□□ -0.73
NBPF3-201ENST00000318220 FGF23Q9GZV9 251 aaPredicted RBP10.51□□□□□ -0.73
NBPF3-201ENST00000318220 TRGV11A0A075B6L2 103 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 SPATA31B1PQ5VZV4 182 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 LINC00311Q8N616 119 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 PRADC1Q9BSG0 188 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 PSMG3Q9BT73 122 aaPredicted RBP10.51□□□□□ -0.73
NBPF3-201ENST00000318220 GGTLC1Q9BX51 225 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 WT1-ASQ06250 92 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 MEIG1Q5JSS6 88 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 ZNF833PQ6ZTB9 187 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 Q8N7P7 452 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 OR11H6Q8NGC7 330 aa10.51□□□□□ -0.73
NBPF3-201ENST00000318220 PAX9P55771 341 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 HERVK_113P61574 105 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 APRG1Q8IVJ8 170 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 SLC17A3O00476 420 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 UQCC3Q6UW78 93 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 ANAPC16Q96DE5 110 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 SEPSECSQ9HD40 501 aaKnown RBP10.5□□□□□ -0.73
NBPF3-201ENST00000318220 OTORQ9NRC9 128 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 JKAMPQ9P055 326 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 LHBP01229 141 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 MALP21145 153 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 LURAP1LQ8IV03 231 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 PRR25Q96S07 402 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 ESM1Q9NQ30 184 aa10.5□□□□□ -0.73
NBPF3-201ENST00000318220 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
NBPF3-201ENST00000318220 OBSL1O75147 1896 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 GFI1BQ5VTD9 330 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 C1orf147Q96MC9 270 aaPredicted RBP10.49□□□□□ -0.73
NBPF3-201ENST00000318220 KLK9Q9UKQ9 250 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 PPP1R17O96001 155 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 SUPT4H1P63272 117 aaKnown RBP10.49□□□□□ -0.73
NBPF3-201ENST00000318220 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
NBPF3-201ENST00000318220 HSPB9Q9BQS6 159 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 EPDR1Q9UM22 224 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 IGHV3-16A0A0C4DH30 117 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 SRSF9Q13242 221 aaKnown RBP eCLIP10.49□□□□□ -0.73
NBPF3-201ENST00000318220 LINC00477Q96M19 166 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 CHD6Q8TD26 2715 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 TMEM218A2RU14 115 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 DEFB4AO15263 64 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 DPPA3Q6W0C5 159 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
NBPF3-201ENST00000318220 DSPP15924 2871 aaKnown RBP10.48□□□□□ -0.73
NBPF3-201ENST00000318220 LGALS1P09382 135 aaKnown RBP10.48□□□□□ -0.73
NBPF3-201ENST00000318220 C18orf15Q96N68 181 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 TRGV9Q99603 122 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 FLNAP21333 2647 aaKnown RBP10.48□□□□□ -0.73
NBPF3-201ENST00000318220 ITGB1BP1O14713 200 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 ZNF138P52744 262 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 VN1R17PQ8TDU5 208 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 XIRP2A4UGR9 3374 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 H0YIZ8 118 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 CD28P10747 220 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 KIAA1549Q9HCM3 1950 aa10.48□□□□□ -0.73
NBPF3-201ENST00000318220 IGHV7-81A0A0B4J1V7 117 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 FAM90A9PA6NNJ1 464 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 PSG3Q16557 428 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 CBLN2Q8IUK8 224 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 PGPEP1LA6NFU8 196 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 TSTD3H0UI37 97 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 CGB3P0DN86 165 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 LINC00469Q8N7U9 141 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 AJUBAQ96IF1 538 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 NIT2Q9NQR4 276 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 ERCC8Q13216 396 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 NMSQ5H8A3 153 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 PRR31Q5SQ13 230 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 PHLDA1Q8WV24 401 aaPredicted RBP10.47□□□□□ -0.73
NBPF3-201ENST00000318220 ZNF292O60281 2723 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 SHISA2Q6UWI4 295 aa10.47□□□□□ -0.73
NBPF3-201ENST00000318220 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.47□□□□□ -0.73
NBPF3-201ENST00000318220 A0A0J9YY99 117 aa10.46□□□□□ -0.73
NBPF3-201ENST00000318220 RPL36AP83881 106 aaKnown RBP10.46□□□□□ -0.73
NBPF3-201ENST00000318220 TMEM136Q6ZRR5 245 aa10.46□□□□□ -0.73
NBPF3-201ENST00000318220 PUSL1Q8N0Z8 303 aaKnown RBP10.46□□□□□ -0.73
NBPF3-201ENST00000318220 RPL36ALQ969Q0 106 aaKnown RBP10.46□□□□□ -0.73
NBPF3-201ENST00000318220 F6UB75 175 aa10.46□□□□□ -0.74
NBPF3-201ENST00000318220 A0A1B0GUT8 65 aa10.46□□□□□ -0.74
NBPF3-201ENST00000318220 C15orf62A8K5M9 175 aa10.46□□□□□ -0.74
NBPF3-201ENST00000318220 DEFB135Q30KP9 77 aa10.46□□□□□ -0.74
NBPF3-201ENST00000318220 ZNF876PQ49A33 203 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms