RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 LINC00305Q7Z4B0 112 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 TMEM167AQ8TBQ9 72 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 CELSR1Q9NYQ6 3014 aa12.59□□□□□ -0.39
USH1C-202ENST00000318024 A8MWL6 223 aa12.58□□□□□ -0.39
USH1C-202ENST00000318024 KLRD1Q13241 179 aa12.58□□□□□ -0.39
USH1C-202ENST00000318024 RUSC1-AS1Q66K80 236 aa12.58□□□□□ -0.39
USH1C-202ENST00000318024 LINC00311Q8N616 119 aa12.58□□□□□ -0.39
USH1C-202ENST00000318024 SGK494Q96LW2 274 aa12.58□□□□□ -0.39
USH1C-202ENST00000318024 HARBI1Q96MB7 349 aa12.58□□□□□ -0.39
USH1C-202ENST00000318024 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 PGPA6NDG6 321 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 OR2T8A6NH00 312 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 LMO4P61968 165 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 MUC21Q5SSG8 566 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 PVRIGQ6DKI7 326 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 ERASQ7Z444 233 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 PDPNQ86YL7 162 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 TMEM186Q96B77 213 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
USH1C-202ENST00000318024 WNK2Q9Y3S1 2297 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 LOC102724200A0A096LPH7 203 aaPredicted RBP12.57□□□□□ -0.4
USH1C-202ENST00000318024 FAM231BA6NCW3 169 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 IGLV1-47P01700 117 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 SLC25A5P05141 298 aaKnown RBP12.57□□□□□ -0.4
USH1C-202ENST00000318024 CRYGCP07315 174 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 OR5AL1P0C617 328 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 PET117Q6UWS5 81 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 CST9LQ9H4G1 147 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 IGHV3-48P01763 117 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 BMI1P35226 326 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 MRGPRG-AS1Q2M3A8 158 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 C10orf55Q5SWW7 151 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 ETFRF1Q6IPR1 90 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 STXBP6Q8NFX7 210 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 PGLYRP4Q96LB8 373 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 TMEM191AQ9H0A3 160 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 MS4A6AQ9H2W1 248 aa12.57□□□□□ -0.4
USH1C-202ENST00000318024 BUB1B-PAK6H3BSN5 160 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 IGLV2-23P01705 113 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 PSG1P11464 419 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 C12orf54Q6X4T0 127 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 RBPMS2Q6ZRY4 209 aaKnown RBP12.56□□□□□ -0.4
USH1C-202ENST00000318024 OR4A5Q8NH83 315 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 ENSAO43768 121 aaKnown RBP12.56□□□□□ -0.4
USH1C-202ENST00000318024 CD5LO43866 347 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 GP9P14770 177 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 KRTAP10-9P60411 292 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 OCIAD2Q56VL3 154 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 LDLRAD2Q5SZI1 272 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 LINC01545Q5VT33 79 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 FMC1Q96HJ9 113 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 RITA1Q96K30 269 aa12.56□□□□□ -0.4
USH1C-202ENST00000318024 APOA2P02652 100 aa12.55□□□□□ -0.4
USH1C-202ENST00000318024 NBEAP1P0C6P0 100 aa12.55□□□□□ -0.4
USH1C-202ENST00000318024 FOXE3Q13461 319 aa12.55□□□□□ -0.4
USH1C-202ENST00000318024 C5orf17Q8NAS9 161 aa12.55□□□□□ -0.4
USH1C-202ENST00000318024 PTPN13Q12923 2485 aa12.55□□□□□ -0.4
USH1C-202ENST00000318024 IGHV4-30-2A0A087WSY4 118 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 ZNF785A8K8V0 405 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 HAX1O00165 279 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 P01737 135 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 RBP4P02753 201 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 TCRAP04437 139 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 PLA2G2AP14555 144 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 SMIM15Q7Z3B0 74 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 VMO1Q7Z5L0 202 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 BLNKQ8WV28 456 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 FLYWCH2Q96CP2 140 aaKnown RBP12.54□□□□□ -0.4
USH1C-202ENST00000318024 ABCA12Q86UK0 2595 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 HOXB4P17483 251 aaPredicted RBP12.54□□□□□ -0.4
USH1C-202ENST00000318024 ZNF137PP52743 207 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 HIST1H1AQ02539 215 aaPredicted RBP12.54□□□□□ -0.4
USH1C-202ENST00000318024 AMMECR1LQ6DCA0 310 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 GATD1Q8NB37 220 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 PIMREGQ9BSJ6 248 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 HILPDAQ9Y5L2 63 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 INSIG2Q9Y5U4 225 aa12.54□□□□□ -0.4
USH1C-202ENST00000318024 PLXNB1O43157 2135 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 PSG9Q00887 426 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 HIST2H2BCQ6DN03 193 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 LHFPL4Q7Z7J7 247 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 C10orf105Q8TEF2 133 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 TRGV9Q99603 122 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
USH1C-202ENST00000318024 TRAV8-6A0A0B4J262 113 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 A0A1W2PPI3 338 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 M0R1W7 72 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 PRTN3P24158 256 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 ZNF138P52744 262 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 PAX2Q02962 417 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 RNF151Q2KHN1 245 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 HCP5Q6MZN7 132 aa12.53□□□□□ -0.4
USH1C-202ENST00000318024 OR4C13Q8NGP0 309 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms