RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TOMM20LQ6UXN7 152 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 SGK494Q96LW2 274 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 ZMAT5Q9UDW3 170 aaKnown RBP11.14□□□□□ -0.63
VRK3-201ENST00000316763 SOX21Q9Y651 276 aaPredicted RBP11.14□□□□□ -0.63
VRK3-201ENST00000316763 OTOGQ6ZRI0 2925 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 TEX15Q9BXT5 2789 aa11.14□□□□□ -0.63
VRK3-201ENST00000316763 FLNAP21333 2647 aaKnown RBP11.13□□□□□ -0.63
VRK3-201ENST00000316763 CENPVL3A0A0U1RRI6 287 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 H3BRN7 92 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 IGHV4-31P0DP07 118 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 MFAP4P55083 255 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 DYNAPQ8N1N2 210 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■■■□ 21.2
VRK3-201ENST00000316763 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 GNG7O60262 68 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 GATA3P23771 443 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 AMTP48728 403 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 LYPD1Q8N2G4 141 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 LINC01356Q8N9X3 169 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 ARPC1AQ92747 370 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 RNF125Q96EQ8 232 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 FAM103A1Q9BTL3 118 aaKnown RBP11.13□□□□□ -0.63
VRK3-201ENST00000316763 PRSS22Q9GZN4 317 aa11.13□□□□□ -0.63
VRK3-201ENST00000316763 ABCA1O95477 2261 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 KIR2DL5BA0A0G2JN68 375 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 KIR2DL5BA0A0G2JPC4 375 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 A0A1W2PS18 150 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 C19orf71A6NCJ1 209 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 NCBP2LA6PVI3 153 aaKnown RBP11.12□□□□□ -0.63
VRK3-201ENST00000316763 K7EQM0 130 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 CD24P25063 80 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 SAA4P35542 130 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 SLAQ13239 276 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 ASPHD1Q5U4P2 390 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 Q86TA4 180 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 KIR2DL5AQ8N109 375 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 PIP4P2Q8N4L2 257 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 ZNF48Q96MX3 618 aaPredicted RBP11.12□□□□□ -0.63
VRK3-201ENST00000316763 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 HIF1ANQ9NWT6 349 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 THYN1Q9P016 225 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 CREBBPQ92793 2442 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 ZANQ9Y493 2812 aa11.12□□□□□ -0.63
VRK3-201ENST00000316763 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 WI2-2373I1.2A0A1W2PRP0 233 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 NPFFO15130 113 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 OR2J3O76001 311 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 IL4P05112 153 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 HBBP68871 147 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 GOLT1AQ6ZVE7 132 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 ZNF491Q8N8L2 437 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 OR4B1Q8NGF8 309 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 CELSR1Q9NYQ6 3014 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 IGLV11-55A0A075B6I3 123 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 FAM231BA6NCW3 169 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
VRK3-201ENST00000316763 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 KLF5Q13887 457 aaPredicted RBP11.11□□□□□ -0.63
VRK3-201ENST00000316763 EBI3Q14213 229 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 NRN1Q9NPD7 142 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 ACANP16112 2415 aa11.11□□□□□ -0.63
VRK3-201ENST00000316763 IGHV1-69DA0A0B4J2H0 117 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 A0A1B0GXF2 115 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 TGFAP01135 160 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 IGHV1-69P01742 117 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 PMCHP20382 165 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 CAMPP49913 170 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 KRTDAPP60985 99 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 FAM162BQ5T6X4 162 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 CYB5R2Q6BCY4 276 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 TCF24Q7RTU0 167 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 RCHY1Q96PM5 261 aa11.1□□□□□ -0.63
VRK3-201ENST00000316763 TMEM11P17152 192 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 CD33P20138 364 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 FCGR2BP31994 310 aaPredicted RBP11.09□□□□□ -0.63
VRK3-201ENST00000316763 Q56UQ5 140 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 KLF17Q5JT82 389 aaPredicted RBP11.09□□□□□ -0.63
VRK3-201ENST00000316763 GDF5OSQ5U4N7 250 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 LINC00322Q6ZN03 302 aaPredicted RBP11.09□□□□□ -0.63
VRK3-201ENST00000316763 RBPMS2Q6ZRY4 209 aaKnown RBP11.09□□□□□ -0.63
VRK3-201ENST00000316763 Q8N6K4 173 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 VN1R17PQ8TDU5 208 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 C2orf88Q9BSF0 95 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 VAMP8Q9BV40 100 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 C1RLQ9NZP8 487 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 FBXL7Q9UJT9 491 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 ZFP30Q9Y2G7 519 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 C21orf62Q9NYP8 219 aa11.09□□□□□ -0.63
VRK3-201ENST00000316763 CSPG4Q6UVK1 2322 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms