RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MED13LQ71F56 2210 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 C7orf71A4D174 169 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 RUSC1-AS1Q66K80 236 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 C5orf17Q8NAS9 161 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 KAAG1Q9UBP8 84 aa13.65□□□□□ -0.22
SCAMP4-201ENST00000316097 ZNF462Q96JM2 2506 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 COL8A1P27658 744 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 HTR1DP28221 377 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 ZNF833PQ6ZTB9 187 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 C2orf91Q6ZV80 131 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 FLYWCH2Q96CP2 140 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 GFRA4Q9GZZ7 299 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 CSTL1Q9H114 145 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 CSMD2Q7Z408 3487 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 TRAV8-1A0A0A6YYK1 113 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 C22orf46C9J442 243 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 TCRAP04437 139 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 SUB1P53999 127 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 LINC01545Q5VT33 79 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 BPIFA4PQ86YQ2 179 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 Q9H3A6 140 aa13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 MAP1AP78559 2803 aaPredicted RBP13.64□□□□□ -0.23
SCAMP4-201ENST00000316097 COX8AP10176 69 aa13.63□□□□□ -0.23
SCAMP4-201ENST00000316097 CIARTQ8N365 385 aaPredicted RBP13.63□□□□□ -0.23
SCAMP4-201ENST00000316097 TEX45Q8NA69 505 aa13.63□□□□□ -0.23
SCAMP4-201ENST00000316097 SELENOKQ9Y6D0 94 aa13.63□□□□□ -0.23
SCAMP4-201ENST00000316097 INS-IGF2F8WCM5 200 aa13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 SAP30O75446 220 aa13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 IGLC1P0CG04 106 aa13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 DLX6P56179 175 aa13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 Q71RC1 249 aaPredicted RBP13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 TMEM167AQ8TBQ9 72 aa13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 NEU4Q8WWR8 484 aaPredicted RBP13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 MEGF9Q9H1U4 602 aa13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 APOHP02749 345 aaPredicted RBP13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 TMEM155Q4W5P6 130 aa13.62□□□□□ -0.23
SCAMP4-201ENST00000316097 IGHV3-21A0A0B4J1V1 117 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 GAGE10A6NGK3 116 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 NCR2O95944 276 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 AP5S1Q9NUS5 200 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 FAM231BA6NCW3 169 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 HAX1O00165 279 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 GP9P14770 177 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 HCP5Q6MZN7 132 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 OR5AN1Q8NGI8 311 aa13.61□□□□□ -0.23
SCAMP4-201ENST00000316097 PLXNB1O43157 2135 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 TMEM97Q5BJF2 176 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 Q86TA4 180 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 OR10X1Q8NGY0 326 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 A0A1W2PPI3 338 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 NPIPB6E9PJ23 425 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 PRNTQ86SH4 94 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 OR4C13Q8NGP0 309 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 ZNF747Q9BV97 191 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 TPSG1Q9NRR2 321 aa13.6□□□□□ -0.23
SCAMP4-201ENST00000316097 APELAP0DMC3 54 aa13.59□□□□□ -0.23
SCAMP4-201ENST00000316097 RIPPLY3P57055 190 aa13.59□□□□□ -0.23
SCAMP4-201ENST00000316097 TMEM30BQ3MIR4 351 aa13.59□□□□□ -0.23
SCAMP4-201ENST00000316097 VSTM2AQ8TAG5 236 aa13.59□□□□□ -0.23
SCAMP4-201ENST00000316097 IGFBPL1Q8WX77 278 aa13.59□□□□□ -0.23
SCAMP4-201ENST00000316097 ARMS2P0C7Q2 107 aa13.59□□□□□ -0.23
SCAMP4-201ENST00000316097 DTX2Q86UW9 622 aa13.59□□□□□ -0.23
SCAMP4-201ENST00000316097 PPIAL4CA0A0B4J2A2 164 aa13.58□□□□□ -0.23
SCAMP4-201ENST00000316097 SLC25A17O43808 307 aa13.58□□□□□ -0.23
SCAMP4-201ENST00000316097 PPIAL4GP0DN37 164 aa13.58□□□□□ -0.23
SCAMP4-201ENST00000316097 SEC11AP67812 179 aa13.58□□□□□ -0.23
SCAMP4-201ENST00000316097 IGHV3-72A0A0B4J1Y9 119 aa13.58□□□□□ -0.24
SCAMP4-201ENST00000316097 PRB4P10163 310 aaPredicted RBP13.58□□□□□ -0.24
SCAMP4-201ENST00000316097 TCTAP57738 103 aa13.58□□□□□ -0.24
SCAMP4-201ENST00000316097 GOLT1AQ6ZVE7 132 aa13.58□□□□□ -0.24
SCAMP4-201ENST00000316097 FA2HQ7L5A8 372 aa13.58□□□□□ -0.24
SCAMP4-201ENST00000316097 AP1S3Q96PC3 154 aa13.58□□□□□ -0.24
SCAMP4-201ENST00000316097 NAA38Q9BRA0 125 aaKnown RBP13.58□□□□□ -0.24
SCAMP4-201ENST00000316097 SPG11Q96JI7 2443 aa13.58□□□□□ -0.24
SCAMP4-201ENST00000316097 A0A1B0GUT8 65 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 COX7A1P24310 79 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 OR4A5Q8NH83 315 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 PRSS3P2Q8NHM4 247 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 ASCL2Q99929 193 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 IGLV2-23P01705 113 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 CSN1S1P47710 185 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 EXOC3-AS1Q8N2X6 119 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 OR8A1Q8NGG7 326 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 OR10AG1Q8NH19 301 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 SRSF12Q8WXF0 261 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 ONECUT1Q9UBC0 465 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 FER1L6-AS1Q8NA97 138 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 RITA1Q96K30 269 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 TRGV9Q99603 122 aa13.57□□□□□ -0.24
SCAMP4-201ENST00000316097 DOPEY1Q5JWR5 2465 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 OVOL3O00110 214 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 TMEM133Q9H2Q1 129 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 RABAC1Q9UI14 185 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 FAM106CPP0CH98 169 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 FGF6P10767 208 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 FAM106AQ4KMX7 169 aa13.56□□□□□ -0.24
SCAMP4-201ENST00000316097 UFSP1Q6NVU6 142 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms