RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 RITA1Q96K30 269 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 SHANK1Q9Y566 2161 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 A0A0G2JRQ6 117 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 DANCRP0C864 163 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 RSPO1Q2MKA7 263 aaPredicted RBP7.19□□□□□ -1.26
CTC1-201ENST00000315684 HIVEP2P31629 2446 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 DNLZQ5SXM8 178 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 ZFP30Q9Y2G7 519 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 TOMM40O96008 361 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 IGHV4-31P0DP07 118 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 ZNF876PQ49A33 203 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 PIFOQ8TCI5 191 aa7.19□□□□□ -1.26
CTC1-201ENST00000315684 APOHP02749 345 aaPredicted RBP7.18□□□□□ -1.26
CTC1-201ENST00000315684 A0A1B0GUT8 65 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 IQCJQ1A5X6 159 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 NHLRC3Q5JS37 347 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 ZNF833PQ6ZTB9 187 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 NCOR2Q9Y618 2525 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 EREGO14944 169 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 HINT1P49773 126 aaPredicted RBP7.18□□□□□ -1.26
CTC1-201ENST00000315684 RPP25LQ8N5L8 163 aaKnown RBP7.18□□□□□ -1.26
CTC1-201ENST00000315684 IGHV3-38A0A0C4DH36 116 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 IGKV1-6A0A0C4DH72 117 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 TRGC2P03986 189 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 RNASE2P10153 161 aaKnown RBP7.18□□□□□ -1.26
CTC1-201ENST00000315684 AZU1P20160 251 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 HSPB9Q9BQS6 159 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 TRAV8-6A0A0B4J262 113 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 NCR2O95944 276 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 ZNF138P52744 262 aa7.18□□□□□ -1.26
CTC1-201ENST00000315684 PRR25Q96S07 402 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 GGTLC1Q9BX51 225 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 VCX2Q9H322 139 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 WFDC1Q9HC57 220 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 FREM1Q5H8C1 2179 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 DOCK11Q5JSL3 2073 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 LEPROTL1O95214 131 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 FOLR2P14207 255 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 C22orf34Q6ZV56 151 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 C14orf178Q8N769 122 aaPredicted RBP7.17□□□□□ -1.26
CTC1-201ENST00000315684 PARD6GQ9BYG4 376 aaPredicted RBP7.17□□□□□ -1.26
CTC1-201ENST00000315684 CD5P06127 495 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 CENPFP49454 3210 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 A0A1B0GV72 72 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 F6UB75 175 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 TCRAP04437 139 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 RPL36AP83881 106 aaKnown RBP7.17□□□□□ -1.26
CTC1-201ENST00000315684 RPL36ALQ969Q0 106 aaKnown RBP7.17□□□□□ -1.26
CTC1-201ENST00000315684 PSMG3Q9BT73 122 aaPredicted RBP7.17□□□□□ -1.26
CTC1-201ENST00000315684 NRN1Q9NPD7 142 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 LOC107984156A0A0G2JMH3 177 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 ARL17AQ8IVW1 177 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 C1orf159Q96HA4 380 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 HIST1H4GQ99525 98 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 TRGV9Q99603 122 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 SNAI2O43623 268 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 CKS1BP61024 79 aa7.17□□□□□ -1.26
CTC1-201ENST00000315684 A0A1B0GUS0 222 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 DMRT1Q9Y5R6 373 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 CDSNQ15517 529 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 C9orf139Q6ZV77 190 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 NOP10Q9NPE3 64 aaKnown RBP7.16□□□□□ -1.26
CTC1-201ENST00000315684 IGHV4OR15-8A0A075B7B6 117 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 A0A087WW49 117 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 KRTAP10-9P60411 292 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 PSG3Q16557 428 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 SMIM12Q96EX1 92 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 SDHCQ99643 169 aaPredicted RBP7.16□□□□□ -1.26
CTC1-201ENST00000315684 ATP5LO75964 103 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 IFI27P40305 119 aaPredicted RBP7.16□□□□□ -1.26
CTC1-201ENST00000315684 PRRC2AP48634 2157 aaKnown RBP7.16□□□□□ -1.26
CTC1-201ENST00000315684 ETV2O00321 342 aaPredicted RBP7.16□□□□□ -1.26
CTC1-201ENST00000315684 ELANEP08246 267 aa7.16□□□□□ -1.26
CTC1-201ENST00000315684 TRAV13-1A0A0B4J241 112 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 PMCHL1Q16048 86 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 OR10AG1Q8NH19 301 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 SH2D1AO60880 128 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 SUPT4H1P63272 117 aaKnown RBP7.15□□□□□ -1.26
CTC1-201ENST00000315684 RNF126Q9BV68 326 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 CSPG4Q6UVK1 2322 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 CLPSL1A2RUU4 121 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 FBLL1A6NHQ2 334 aaKnown RBP7.15□□□□□ -1.26
CTC1-201ENST00000315684 Q6ZRM9 215 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 C8orf49Q96NF6 230 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 PIEZO2Q9H5I5 2752 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 COX19Q49B96 90 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 C11orf53Q8IXP5 236 aa7.15□□□□□ -1.26
CTC1-201ENST00000315684 H3BRM9 83 aa7.15□□□□□ -1.27
CTC1-201ENST00000315684 QRFPP83859 136 aa7.15□□□□□ -1.27
CTC1-201ENST00000315684 C21orf62-AS1Q17RA5 79 aa7.15□□□□□ -1.27
CTC1-201ENST00000315684 ASPHD1Q5U4P2 390 aa7.15□□□□□ -1.27
CTC1-201ENST00000315684 LINC00469Q8N7U9 141 aa7.15□□□□□ -1.27
CTC1-201ENST00000315684 LDLRAD4O15165 306 aa7.14□□□□□ -1.27
CTC1-201ENST00000315684 HLA-DQA1P01909 254 aa7.14□□□□□ -1.27
CTC1-201ENST00000315684 FAM90A9PA6NNJ1 464 aa7.14□□□□□ -1.27
CTC1-201ENST00000315684 ZNF25P17030 456 aaPredicted RBP7.14□□□□□ -1.27
CTC1-201ENST00000315684 DEFB135Q30KP9 77 aa7.14□□□□□ -1.27
CTC1-201ENST00000315684 LSM4Q9Y4Z0 139 aaKnown RBP7.14□□□□□ -1.27
CTC1-201ENST00000315684 KMT2EQ8IZD2 1858 aa7.14□□□□□ -1.27
CTC1-201ENST00000315684 ACACBO00763 2458 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms