RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 AMN1Q8IY45 258 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 OR5A1Q8NGJ0 315 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 A8MWP6 167 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 GGTLC3B5MD39 225 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 PDE6HQ13956 83 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 GTSCR1Q86UQ5 136 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 LYPD6Q86Y78 171 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 SSC4DQ8WTU2 575 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 MEGF9Q9H1U4 602 aa11.12□□□□□ -0.63
SPAST-201ENST00000315285 TRGV2A0A075B6R0 118 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 H3BUX3 64 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 MPV17L2Q567V2 206 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 LYPD6BQ8NI32 183 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 SLC25A2Q9BXI2 301 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 TRGV11A0A075B6L2 103 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 SCGB1A1P11684 91 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 EMP1P54849 157 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
SPAST-201ENST00000315285 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
SPAST-201ENST00000315285 KIAA1671Q9BY89 1806 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 CNTFRP26992 372 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 DTX1Q86Y01 620 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 C18orf32Q8TCD1 76 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 SRRM4A7MD48 611 aaKnown RBP11.11□□□□□ -0.63
SPAST-201ENST00000315285 DKK1O94907 266 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 ARMS2P0C7Q2 107 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 IGFL3Q6UXB1 125 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 TOMM7Q9P0U1 55 aa11.11□□□□□ -0.63
SPAST-201ENST00000315285 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 ZNF562Q6V9R5 426 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 ZNF114Q8NC26 417 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 ZNF479Q96JC4 524 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 ZNF492Q9P255 531 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 MALRD1Q5VYJ5 2156 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 A0A087X0K7 114 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 HOXA3O43365 443 aaPredicted RBP11.1□□□□□ -0.63
SPAST-201ENST00000315285 CEACAM8P31997 349 aaPredicted RBP11.1□□□□□ -0.63
SPAST-201ENST00000315285 MRPL52Q86TS9 123 aaKnown RBP11.1□□□□□ -0.63
SPAST-201ENST00000315285 IGLV3-9A0A075B6K5 115 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 EREGO14944 169 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 LOXP28300 417 aaPredicted RBP11.1□□□□□ -0.63
SPAST-201ENST00000315285 PRR30Q53SZ7 412 aaPredicted RBP11.1□□□□□ -0.63
SPAST-201ENST00000315285 PCNX2A6NKB5 2137 aa11.1□□□□□ -0.63
SPAST-201ENST00000315285 MMP23AO75900 390 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 STHQ8IWL8 128 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 MCRIP2Q9BUT9 160 aaKnown RBP11.09□□□□□ -0.63
SPAST-201ENST00000315285 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 SAA4P35542 130 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 YPEL3P61236 119 aaPredicted RBP11.09□□□□□ -0.63
SPAST-201ENST00000315285 PLA2G2CQ5R387 149 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 CD28P10747 220 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 TEX36Q5VZQ5 186 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 V9GYV3 84 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 FAM231BA6NCW3 169 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 CT83Q5H943 113 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
SPAST-201ENST00000315285 DPH3P1Q9H4G8 78 aa11.09□□□□□ -0.63
SPAST-201ENST00000315285 IGKV3D-20A0A0C4DH25 116 aa11.08□□□□□ -0.64
SPAST-201ENST00000315285 BCL6BQ8N143 479 aaPredicted RBP11.08□□□□□ -0.64
SPAST-201ENST00000315285 MTURNQ8N3F0 131 aa11.08□□□□□ -0.64
SPAST-201ENST00000315285 BPESC1Q9GZL8 116 aa11.08□□□□□ -0.64
SPAST-201ENST00000315285 LINC00311Q8N616 119 aa11.08□□□□□ -0.64
SPAST-201ENST00000315285 RNF182Q8N6D2 247 aa11.08□□□□□ -0.64
SPAST-201ENST00000315285 TMEM158Q8WZ71 300 aa11.08□□□□□ -0.64
SPAST-201ENST00000315285 FGF23Q9GZV9 251 aaPredicted RBP11.08□□□□□ -0.64
SPAST-201ENST00000315285 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 IGHV2-70P01814 119 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 TDGF1P3P51864 188 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 TMEM75Q8N9X5 138 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 TMEM8BA6NDV4 472 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 Q6ZSR3 168 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 FAM215AQ9Y5M1 114 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 B4DSR2 109 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 C11orf52Q96A22 123 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 A0A1B0GV72 72 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 DSCR9P59020 149 aa11.07□□□□□ -0.64
SPAST-201ENST00000315285 C14orf178Q8N769 122 aaPredicted RBP11.07□□□□□ -0.64
SPAST-201ENST00000315285 GNLYP22749 145 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 ERCC8Q13216 396 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 TPSG1Q9NRR2 321 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 FAM223BA6NKX1 122 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 FCN3O75636 299 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 TMEM249Q2WGJ8 235 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 FAM223AQ8IWN6 122 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 ZC2HC1BQ5TFG8 222 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 PLNP26678 52 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 POU2AF1Q16633 256 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 SLX1AQ9BQ83 275 aa11.06□□□□□ -0.64
SPAST-201ENST00000315285 COL4A3Q01955 1670 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 NDUFB8O95169 186 aa11.05□□□□□ -0.64
SPAST-201ENST00000315285 ZGRF1Q86YA3 2104 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms