RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 PRELID3AQ96N28 172 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 TPPP3Q9BW30 176 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 TP73-AS1Q9UF72 201 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 OTOGLQ3ZCN5 2332 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 SCGB2A1O75556 95 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 IL4P05112 153 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 S100A7P31151 101 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 APOBEC3AP31941 199 aaPredicted RBP10.93□□□□□ -0.66
MKS1-201ENST00000313863 RNF151Q2KHN1 245 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 FAM104BQ5XKR9 115 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 OR9G4Q8NGQ1 327 aa10.93□□□□□ -0.66
MKS1-201ENST00000313863 ZGRF1Q86YA3 2104 aa10.92□□□□□ -0.66
MKS1-201ENST00000313863 LOC400499M0QZD8 3231 aa10.92□□□□□ -0.66
MKS1-201ENST00000313863 PPIAL4CA0A0B4J2A2 164 aa10.92□□□□□ -0.66
MKS1-201ENST00000313863 C7orf71A4D174 169 aa10.92□□□□□ -0.66
MKS1-201ENST00000313863 MRPS12O15235 138 aaKnown RBP10.92□□□□□ -0.66
MKS1-201ENST00000313863 SIVA1O15304 175 aa10.92□□□□□ -0.66
MKS1-201ENST00000313863 PPIAL4GP0DN37 164 aa10.92□□□□□ -0.66
MKS1-201ENST00000313863 NHLH1Q02575 133 aa10.92□□□□□ -0.66
MKS1-201ENST00000313863 ZNF48Q96MX3 618 aaPredicted RBP10.92□□□□□ -0.66
MKS1-201ENST00000313863 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
MKS1-201ENST00000313863 SHISA9B4DS77 424 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 D6R8Y8 96 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 E7EQL1 145 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 K7ERU9 68 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 HBDP02042 147 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 FCGR2BP31994 310 aaPredicted RBP10.91□□□□□ -0.66
MKS1-201ENST00000313863 IFI27P40305 119 aaPredicted RBP10.91□□□□□ -0.66
MKS1-201ENST00000313863 CRIP1P50238 77 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 GTF2H5Q6ZYL4 71 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 COX8CQ7Z4L0 72 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 OR8A1Q8NGG7 326 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 C17orf77Q96MU5 243 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 MCRIP2Q9BUT9 160 aaKnown RBP10.91□□□□□ -0.66
MKS1-201ENST00000313863 COL25A1Q9BXS0 654 aaPredicted RBP10.91□□□□□ -0.66
MKS1-201ENST00000313863 LY6LH3BQJ8 138 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 GNG7O60262 68 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 COX7A1P24310 79 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 LDLRAD2Q5SZI1 272 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 LYZL1Q6UWQ5 148 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 NPFFR1Q9GZQ6 430 aa10.91□□□□□ -0.66
MKS1-201ENST00000313863 ROS1P08922 2347 aa10.9□□□□□ -0.66
MKS1-201ENST00000313863 NBR2O15453 112 aa10.9□□□□□ -0.66
MKS1-201ENST00000313863 BMI1P35226 326 aa10.9□□□□□ -0.66
MKS1-201ENST00000313863 MFAP4P55083 255 aa10.9□□□□□ -0.66
MKS1-201ENST00000313863 OR4X2Q8NGF9 303 aa10.9□□□□□ -0.66
MKS1-201ENST00000313863 VPS25Q9BRG1 176 aa10.9□□□□□ -0.66
MKS1-201ENST00000313863 H3BRM9 83 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 SH2D1AO60880 128 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 CEACAM3P40198 252 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 HSD52Q0P140 79 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 ERASQ7Z444 233 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 BOD1L2Q8IYS8 172 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 ABCA1O95477 2261 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 NCR2O95944 276 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 CD3EP07766 207 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 RPL7P18124 248 aaKnown RBP10.89□□□□□ -0.67
MKS1-201ENST00000313863 SRSF2Q01130 221 aaKnown RBP10.89□□□□□ -0.67
MKS1-201ENST00000313863 C8orf49Q96NF6 230 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
MKS1-201ENST00000313863 A0A096LNJ9 63 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 LOC389332A0A1B0GUA5 103 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 GAGE12BA1L429 117 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 A1L4Q6 167 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 TIMM23O14925 209 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 SMAD7O15105 426 aaKnown RBP10.88□□□□□ -0.67
MKS1-201ENST00000313863 FGF6P10767 208 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 GFRALQ6UXV0 394 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 NPBQ8NG41 125 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 CNOT1A5YKK6 2376 aaKnown RBP10.88□□□□□ -0.67
MKS1-201ENST00000313863 PKDREJQ9NTG1 2253 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 TRAV8-6A0A0B4J262 113 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 C9orf118A6NHY6 69 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 NPIPB5A8MRT5 1133 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 M0R3E3 92 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 NDUFA3O95167 84 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 CKS2P33552 79 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 LINC01559Q495D7 138 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 MRPL51Q4U2R6 128 aaKnown RBP10.88□□□□□ -0.67
MKS1-201ENST00000313863 Q71RC1 249 aaPredicted RBP10.88□□□□□ -0.67
MKS1-201ENST00000313863 IFI27L1Q96BM0 104 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 DPM3Q9P2X0 92 aa10.88□□□□□ -0.67
MKS1-201ENST00000313863 CEP250Q9BV73 2442 aa10.87□□□□□ -0.67
MKS1-201ENST00000313863 CACNG7P62955 275 aa10.87□□□□□ -0.67
MKS1-201ENST00000313863 AMN1Q8IY45 258 aa10.87□□□□□ -0.67
MKS1-201ENST00000313863 IGFBPL1Q8WX77 278 aa10.87□□□□□ -0.67
MKS1-201ENST00000313863 THYN1Q9P016 225 aa10.87□□□□□ -0.67
MKS1-201ENST00000313863 ONECUT1Q9UBC0 465 aa10.87□□□□□ -0.67
MKS1-201ENST00000313863 RABAC1Q9UI14 185 aa10.87□□□□□ -0.67
MKS1-201ENST00000313863 TMEM213A2RRL7 107 aa10.86□□□□□ -0.67
MKS1-201ENST00000313863 FER1L6-AS1Q8NA97 138 aa10.86□□□□□ -0.67
MKS1-201ENST00000313863 SPENQ96T58 3664 aaKnown RBP10.86□□□□□ -0.67
MKS1-201ENST00000313863 EP300Q09472 2414 aaPredicted RBP10.86□□□□□ -0.67
MKS1-201ENST00000313863 KLK10O43240 276 aa10.86□□□□□ -0.67
MKS1-201ENST00000313863 PRR25Q96S07 402 aa10.86□□□□□ -0.67
MKS1-201ENST00000313863 IGLV11-55A0A075B6I3 123 aa10.85□□□□□ -0.67
MKS1-201ENST00000313863 TMSB15BA0A087X1C1 80 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms