RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 C21orf140B9A014 251 aa8.77□□□□□ -1
GGA2-201ENST00000309859 FAM74A4Q5TZK3 123 aa8.77□□□□□ -1
GGA2-201ENST00000309859 PPDPFLQ8WWR9 84 aa8.77□□□□□ -1
GGA2-201ENST00000309859 IGKV3D-15A0A087WSY6 115 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 IGKV3-15P01624 115 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 EFNA4P52798 201 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 SPANXB1Q9NS25 103 aaPredicted RBP8.77□□□□□ -1.01
GGA2-201ENST00000309859 A0A0U1RRA0 63 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 TNFRSF6BO95407 300 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 C9orf172C9J069 976 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 ZNF688P0C7X2 276 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 C9orf153Q5TBE3 101 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 Q86TA4 180 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 CD177Q8N6Q3 437 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 RNF7Q9UBF6 113 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 GATA1P15976 413 aaPredicted RBP8.77□□□□□ -1.01
GGA2-201ENST00000309859 C2orf91Q6ZV80 131 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 WDR86Q86TI4 376 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
GGA2-201ENST00000309859 GVINP1Q7Z2Y8 2422 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 FOXI1Q12951 378 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 MRPL51Q4U2R6 128 aaKnown RBP8.76□□□□□ -1.01
GGA2-201ENST00000309859 PPP1R27Q86WC6 154 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 FREM1Q5H8C1 2179 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 SPTBN1Q01082 2364 aaKnown RBP8.76□□□□□ -1.01
GGA2-201ENST00000309859 YAE1D1Q9NRH1 226 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 TANC2Q9HCD6 1990 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 FOXE3Q13461 319 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 LGALS9BQ3B8N2 356 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 TMEM78Q5T7P6 136 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 LGALS9CQ6DKI2 356 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 IGF2BP2-AS1Q96M15 143 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 SH2D1AO60880 128 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 COX6CP09669 75 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 GATA3P23771 443 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 NUP210Q8TEM1 1887 aaPredicted RBP8.76□□□□□ -1.01
GGA2-201ENST00000309859 GGNQ86UU5 652 aa8.76□□□□□ -1.01
GGA2-201ENST00000309859 ZCCHC24Q8N2G6 241 aaKnown RBP8.76□□□□□ -1.01
GGA2-201ENST00000309859 PKDREJQ9NTG1 2253 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 IGKV3D-20A0A0C4DH25 116 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 TRBV7-9A0A0J9YWB2 115 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 TMEM75Q8N9X5 138 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 PLXNB1O43157 2135 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 TCF15Q12870 199 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 SHISA2Q6UWI4 295 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 ZNF562Q6V9R5 426 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.75□□□□□ -1.01
GGA2-201ENST00000309859 FOXL2NBQ6ZUU3 175 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 RRN3P1Q2M238 152 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 FAM159AQ6UWV7 190 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 CADP27708 2225 aa8.75□□□□□ -1.01
GGA2-201ENST00000309859 RNASE1P07998 156 aaKnown RBP8.74□□□□□ -1.01
GGA2-201ENST00000309859 RNASE2P10153 161 aaKnown RBP8.74□□□□□ -1.01
GGA2-201ENST00000309859 SLC25A16P16260 332 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 TMEM133Q9H2Q1 129 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 ZNF134P52741 427 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 SRSF6Q13247 344 aaKnown RBP8.74□□□□□ -1.01
GGA2-201ENST00000309859 LINC00322Q6ZN03 302 aaPredicted RBP8.74□□□□□ -1.01
GGA2-201ENST00000309859 Q6ZUT4 128 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 C8orf46Q8TAG6 207 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 LAMA2P24043 3122 aaKnown RBP8.74□□□□□ -1.01
GGA2-201ENST00000309859 TRBV6-6A0A0A6YYG2 114 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 SPRY2O43597 315 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 NEGR1Q7Z3B1 354 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 CACNG8Q8WXS5 425 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 C17orf77Q96MU5 243 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 PRR20EP86478 221 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 PRR20CP86479 221 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 PRR20DP86480 221 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 PRR20BP86481 221 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 PRR20AP86496 221 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 NTN5Q8WTR8 489 aaPredicted RBP8.74□□□□□ -1.01
GGA2-201ENST00000309859 PHLDA3Q9Y5J5 127 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 ADIPOQQ15848 244 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 WIPF2Q8TF74 440 aaPredicted RBP8.74□□□□□ -1.01
GGA2-201ENST00000309859 VCX2Q9H322 139 aa8.74□□□□□ -1.01
GGA2-201ENST00000309859 KIAA1549LQ6ZVL6 1849 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 TRGV8A0A0C4DH27 118 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 GCSAMQ8N6F7 178 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 NGBQ9NPG2 151 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 IGLV2-8P01709 118 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 ID1P41134 155 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 C1orf210Q8IVY1 113 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 DOPEY2Q9Y3R5 2298 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 ECSCRQ19T08 205 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 DUX4L9Q6RFH8 374 aaPredicted RBP8.73□□□□□ -1.01
GGA2-201ENST00000309859 FXYD5Q96DB9 178 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 PATE3B3GLJ2 98 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 LAGE3Q14657 143 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 FAM231DQ6ZW35 169 aa8.73□□□□□ -1.01
GGA2-201ENST00000309859 NXT2Q9NPJ8 142 aaKnown RBP8.73□□□□□ -1.01
GGA2-201ENST00000309859 SLC25A39Q9BZJ4 359 aaPredicted RBP8.72□□□□□ -1.01
GGA2-201ENST00000309859 IGKV1OR2-108A0A075B7D4 117 aa8.72□□□□□ -1.01
GGA2-201ENST00000309859 FAM104BQ5XKR9 115 aa8.72□□□□□ -1.01
GGA2-201ENST00000309859 TNCP24821 2201 aa8.72□□□□□ -1.01
GGA2-201ENST00000309859 TRAV8-3A0A0A6YYJ7 113 aa8.72□□□□□ -1.01
GGA2-201ENST00000309859 HAX1O00165 279 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms