RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LTAP01374 205 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 Q6YL49 198 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 GOLT1AQ6ZVE7 132 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 FAM231DQ6ZW35 169 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 MLST8Q9BVC4 326 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 ZNF580Q9UK33 172 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 SMAD5-AS1Q9Y6J3 95 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 APCP25054 2843 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 IGLV1-40P01703 118 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 RAB9AP51151 201 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 KLK15Q9H2R5 256 aa16.43■□□□□ 0.22
ATG4D-201ENST00000309469 BUB3O43684 328 aa16.42■□□□□ 0.22
ATG4D-201ENST00000309469 PF4V1P10720 104 aa16.42■□□□□ 0.22
ATG4D-201ENST00000309469 PSG9Q00887 426 aa16.42■□□□□ 0.22
ATG4D-201ENST00000309469 CFHR3Q02985 330 aa16.42■□□□□ 0.22
ATG4D-201ENST00000309469 AAMDCQ9H7C9 122 aa16.42■□□□□ 0.22
ATG4D-201ENST00000309469 SERTAD4Q9NUC0 356 aa16.42■□□□□ 0.22
ATG4D-201ENST00000309469 IGLV2-11P01706 119 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 ARL3P36405 182 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 WFDC11Q8NEX6 87 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 TRAPPC1Q9Y5R8 145 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 ZFHX3Q15911 3703 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 TRAV8-1A0A0A6YYK1 113 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 TRBV6-1A0A0K0K1D8 114 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 IFITM10A6NMD0 228 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 ZNF705GA8MUZ8 300 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-201ENST00000309469 GFI1BQ5VTD9 330 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 PRR27Q6MZM9 219 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 NUDT10Q8NFP7 164 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 NUDT11Q96G61 164 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 VPREB3Q9UKI3 123 aa16.41■□□□□ 0.22
ATG4D-201ENST00000309469 Q86TA4 180 aa16.4■□□□□ 0.22
ATG4D-201ENST00000309469 HIST3H2BBQ8N257 126 aa16.4■□□□□ 0.22
ATG4D-201ENST00000309469 METTL26Q96S19 204 aa16.4■□□□□ 0.22
ATG4D-201ENST00000309469 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.39■□□□□ 0.21
ATG4D-201ENST00000309469 DIRC3C9JPN6 131 aa16.39■□□□□ 0.21
ATG4D-201ENST00000309469 K7EQM0 130 aa16.39■□□□□ 0.21
ATG4D-201ENST00000309469 M0R3E3 92 aa16.39■□□□□ 0.21
ATG4D-201ENST00000309469 GATCO43716 136 aaKnown RBP16.39■□□□□ 0.21
ATG4D-201ENST00000309469 S100A2P29034 98 aa16.39■□□□□ 0.21
ATG4D-201ENST00000309469 TMEM95Q3KNT9 176 aa16.39■□□□□ 0.21
ATG4D-201ENST00000309469 PRNTQ86SH4 94 aa16.39■□□□□ 0.21
ATG4D-201ENST00000309469 TMEM75Q8N9X5 138 aa16.39■□□□□ 0.21
ATG4D-201ENST00000309469 A0A0G2JLM5 398 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 SMIM27A0A1W2PRY6 76 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 ZNF253O75346 499 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 TRBV12-3P01733 135 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 PDZD11Q5EBL8 140 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 C1orf194Q5T5A4 169 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 TMEM183AQ8IXX5 376 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 CIARTQ8N365 385 aaPredicted RBP16.38■□□□□ 0.21
ATG4D-201ENST00000309469 GPR61Q9BZJ8 451 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 PRDM13Q9H4Q3 707 aa16.38■□□□□ 0.21
ATG4D-201ENST00000309469 XKRY2A2RUG3 117 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 IGHV3-11P01762 117 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 APOHP02749 345 aaPredicted RBP16.37■□□□□ 0.21
ATG4D-201ENST00000309469 GRAMD2BQ96HH9 432 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 U3KQE9 123 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 IGHV3-66A0A0C4DH42 116 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 ZNF785A8K8V0 405 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 ZNF207O43670 478 aaKnown RBP16.37■□□□□ 0.21
ATG4D-201ENST00000309469 CA1P00915 261 aaPredicted RBP16.37■□□□□ 0.21
ATG4D-201ENST00000309469 CSN1S1P47710 185 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 RPL19P84098 196 aaKnown RBP16.37■□□□□ 0.21
ATG4D-201ENST00000309469 LCNL1Q6ZST4 164 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 OR4X2Q8NGF9 303 aa16.37■□□□□ 0.21
ATG4D-201ENST00000309469 PRRC2AP48634 2157 aaKnown RBP16.36■□□□□ 0.21
ATG4D-201ENST00000309469 A0A087X0K7 114 aa16.36■□□□□ 0.21
ATG4D-201ENST00000309469 HOXA3O43365 443 aaPredicted RBP16.36■□□□□ 0.21
ATG4D-201ENST00000309469 TCL1AP56279 114 aa16.36■□□□□ 0.21
ATG4D-201ENST00000309469 PSG3Q16557 428 aa16.36■□□□□ 0.21
ATG4D-201ENST00000309469 ARL6IP6Q8N6S5 226 aa16.36■□□□□ 0.21
ATG4D-201ENST00000309469 ZNF492Q9P255 531 aa16.36■□□□□ 0.21
ATG4D-201ENST00000309469 PSG8Q9UQ74 426 aa16.36■□□□□ 0.21
ATG4D-201ENST00000309469 COA6Q5JTJ3 125 aaKnown RBP16.35■□□□□ 0.21
ATG4D-201ENST00000309469 LINC00322Q6ZN03 302 aaPredicted RBP16.35■□□□□ 0.21
ATG4D-201ENST00000309469 ZFP30Q9Y2G7 519 aa16.35■□□□□ 0.21
ATG4D-201ENST00000309469 ZANQ9Y493 2812 aa16.35■□□□□ 0.21
ATG4D-201ENST00000309469 CSPG4Q6UVK1 2322 aa16.35■□□□□ 0.21
ATG4D-201ENST00000309469 IGHV3OR16-13A0A075B7E8 117 aa16.35■□□□□ 0.21
ATG4D-201ENST00000309469 IGHV3-74A0A0B4J1X5 117 aa16.35■□□□□ 0.21
ATG4D-201ENST00000309469 NDUFA4O00483 81 aa16.35■□□□□ 0.21
ATG4D-201ENST00000309469 IGHG4P01861 327 aa16.35■□□□□ 0.21
ATG4D-201ENST00000309469 CBLN1P23435 193 aa16.35■□□□□ 0.21
ATG4D-201ENST00000309469 ZNF331Q9NQX6 463 aaPredicted RBP16.35■□□□□ 0.21
ATG4D-201ENST00000309469 DOPEY2Q9Y3R5 2298 aa16.34■□□□□ 0.21
ATG4D-201ENST00000309469 IGHV3-49A0A0A0MS15 119 aa16.34■□□□□ 0.21
ATG4D-201ENST00000309469 SERTM2A0A1B0GWG4 89 aa16.34■□□□□ 0.21
ATG4D-201ENST00000309469 C19orf71A6NCJ1 209 aa16.34■□□□□ 0.21
ATG4D-201ENST00000309469 SMAD7O15105 426 aaKnown RBP16.34■□□□□ 0.21
ATG4D-201ENST00000309469 PRB4P10163 310 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-201ENST00000309469 PRSS22Q9GZN4 317 aa16.34■□□□□ 0.21
ATG4D-201ENST00000309469 PSMB8P28062 276 aa16.33■□□□□ 0.21
ATG4D-201ENST00000309469 UNQ9165/PRO28630Q6UXU0 137 aa16.33■□□□□ 0.2
ATG4D-201ENST00000309469 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.33■□□□□ 0.2
ATG4D-201ENST00000309469 DAZAP1Q96EP5 407 aaKnown RBP16.33■□□□□ 0.2
ATG4D-201ENST00000309469 TMEM89A2RUT3 159 aa16.32■□□□□ 0.2
ATG4D-201ENST00000309469 IZUMO1RA6ND01 250 aa16.32■□□□□ 0.2
ATG4D-201ENST00000309469 SPINK4O60575 86 aa16.32■□□□□ 0.2
ATG4D-201ENST00000309469 FRMD6-AS1P0C7T7 363 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms