RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 BPIFA4PQ86YQ2 179 aa17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 ZNF414Q96IQ9 312 aa17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 OTORQ9NRC9 128 aa17.43■□□□□ 0.38
PDLIM2-202ENST00000308354 M0QZK8 103 aa17.42■□□□□ 0.38
PDLIM2-202ENST00000308354 TRGV3P03979 118 aa17.42■□□□□ 0.38
PDLIM2-202ENST00000308354 PRSS57Q6UWY2 283 aa17.42■□□□□ 0.38
PDLIM2-202ENST00000308354 SMIM27A0A1W2PRY6 76 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 CRIP2P52943 208 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 EEF1AKMT3Q96AZ1 226 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 MRPL18Q9H0U6 180 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 AMBPP02760 352 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 ATP5G2Q06055 141 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 TMEM95Q3KNT9 176 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 FAM231DQ6ZW35 169 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 NUDT10Q8NFP7 164 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 NUDT11Q96G61 164 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 GPR82Q96P67 336 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 PDZD2O15018 2839 aa17.41■□□□□ 0.38
PDLIM2-202ENST00000308354 A0A1B0GUS0 222 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 SMAD7O15105 426 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 SCGB2A1O75556 95 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 IGLC2P0DOY2 106 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 CDPF1Q6NVV7 123 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 LCNL1Q6ZST4 164 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 OR4F17Q8NGA8 305 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 FMC1Q96HJ9 113 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 TRBV19A0A075B6N1 114 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 SNURFLB1AK76 121 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 FSHBP01225 129 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 CYB5R2Q6BCY4 276 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 TOMM20LQ6UXN7 152 aa17.4■□□□□ 0.38
PDLIM2-202ENST00000308354 PPIFP30405 207 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-202ENST00000308354 TPPP2P59282 170 aa17.39■□□□□ 0.37
PDLIM2-202ENST00000308354 TRAV8-1A0A0A6YYK1 113 aa17.39■□□□□ 0.37
PDLIM2-202ENST00000308354 MRPS12O15235 138 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-202ENST00000308354 GATCO43716 136 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-202ENST00000308354 MLST8Q9BVC4 326 aa17.39■□□□□ 0.37
PDLIM2-202ENST00000308354 KLK15Q9H2R5 256 aa17.39■□□□□ 0.37
PDLIM2-202ENST00000308354 GRIFINA4D1Z8 144 aa17.38■□□□□ 0.37
PDLIM2-202ENST00000308354 LTAP01374 205 aa17.38■□□□□ 0.37
PDLIM2-202ENST00000308354 MRPL54Q6P161 138 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-202ENST00000308354 CMTM2Q8TAZ6 248 aa17.38■□□□□ 0.37
PDLIM2-202ENST00000308354 RABAC1Q9UI14 185 aa17.38■□□□□ 0.37
PDLIM2-202ENST00000308354 TRBV7-1A0A0A6YYK4 115 aa17.37■□□□□ 0.37
PDLIM2-202ENST00000308354 GOLT1AQ6ZVE7 132 aa17.37■□□□□ 0.37
PDLIM2-202ENST00000308354 GSN-AS1Q9NRJ2 163 aa17.37■□□□□ 0.37
PDLIM2-202ENST00000308354 UNC79Q9P2D8 2635 aa17.37■□□□□ 0.37
PDLIM2-202ENST00000308354 FLNAP21333 2647 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-202ENST00000308354 IL17RELQ6ZVW7 336 aa17.37■□□□□ 0.37
PDLIM2-202ENST00000308354 SMIM12Q96EX1 92 aa17.37■□□□□ 0.37
PDLIM2-202ENST00000308354 GNB1LQ9BYB4 327 aa17.37■□□□□ 0.37
PDLIM2-202ENST00000308354 PF4V1P10720 104 aa17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 SIGLEC15Q6ZMC9 328 aa17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 LINC00322Q6ZN03 302 aaPredicted RBP17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 ZFAND3Q9H8U3 227 aa17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 IGHV3-11P01762 117 aa17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 Q86TA4 180 aa17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 TMEM256Q8N2U0 113 aa17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 ZMAT5Q9UDW3 170 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 RNF24Q9Y225 148 aa17.36■□□□□ 0.37
PDLIM2-202ENST00000308354 FAM223BA6NKX1 122 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 BMPR1BO00238 502 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 TRBV12-3P01733 135 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 RPL19P84098 196 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 FAM223AQ8IWN6 122 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 GRAMD2BQ96HH9 432 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 NAT8BQ9UHF3 227 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 IGHV3OR16-13A0A075B7E8 117 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 IGHV3-74A0A0B4J1X5 117 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 IGHV3-66A0A0C4DH42 116 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 IZUMO1RA6ND01 250 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 ZNF207O43670 478 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 IGLV2-11P01706 119 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 TMEM136Q6ZRR5 245 aa17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 Q71RC1 249 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-202ENST00000308354 RAB4BP61018 213 aa17.34■□□□□ 0.37
PDLIM2-202ENST00000308354 S100A7AQ86SG5 101 aa17.34■□□□□ 0.37
PDLIM2-202ENST00000308354 SONP18583 2426 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-202ENST00000308354 HOXA3O43365 443 aaPredicted RBP17.33■□□□□ 0.37
PDLIM2-202ENST00000308354 WDR73Q6P4I2 378 aa17.33■□□□□ 0.37
PDLIM2-202ENST00000308354 Q6YL49 198 aa17.33■□□□□ 0.37
PDLIM2-202ENST00000308354 GBGT1Q8N5D6 347 aa17.33■□□□□ 0.37
PDLIM2-202ENST00000308354 DUX5Q96PT3 197 aa17.33■□□□□ 0.37
PDLIM2-202ENST00000308354 IGHV3-49A0A0A0MS15 119 aa17.33■□□□□ 0.36
PDLIM2-202ENST00000308354 NUPR1O60356 82 aa17.33■□□□□ 0.36
PDLIM2-202ENST00000308354 PRNTQ86SH4 94 aa17.33■□□□□ 0.36
PDLIM2-202ENST00000308354 CLPSL1A2RUU4 121 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 C9orf139Q6ZV77 190 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 NUP35Q8NFH5 326 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 TSKUQ8WUA8 353 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 NEU1Q99519 415 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 HECTD1Q9ULT8 2610 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 APOHP02749 345 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 MT-ND6P03923 174 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 CRISP2P16562 243 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 LYPD1Q8N2G4 141 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 OR5R1Q8NH85 324 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 VPREB3Q9UKI3 123 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 TP53TG3Q9ULZ0 132 aa17.32■□□□□ 0.36
PDLIM2-202ENST00000308354 M0R3E3 92 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms