RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GTSCR1Q86UQ5 136 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 ARL17AQ8IVW1 177 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 NEU4Q8WWR8 484 aaPredicted RBP10.47□□□□□ -0.73
TRIM35-201ENST00000305364 PRUNE2Q8WUY3 3088 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 ZNF479Q96JC4 524 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 SLC25A39Q9BZJ4 359 aaPredicted RBP10.47□□□□□ -0.73
TRIM35-201ENST00000305364 FBXL15Q9H469 300 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 NCBP2LA6PVI3 153 aaKnown RBP10.47□□□□□ -0.73
TRIM35-201ENST00000305364 VWC2LB2RUY7 222 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 AZU1P20160 251 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 MTURNQ8N3F0 131 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 MDS2Q8NDY4 140 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 TRANK1O15050 2925 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 TRGV9Q99603 122 aa10.47□□□□□ -0.73
TRIM35-201ENST00000305364 TSSC4Q9Y5U2 329 aaPredicted RBP10.47□□□□□ -0.73
TRIM35-201ENST00000305364 TEX48A0A1B0GUV7 120 aa10.46□□□□□ -0.73
TRIM35-201ENST00000305364 LTAP01374 205 aa10.46□□□□□ -0.73
TRIM35-201ENST00000305364 SRSF9Q13242 221 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRIM35-201ENST00000305364 TTC9CQ8N5M4 171 aa10.46□□□□□ -0.73
TRIM35-201ENST00000305364 GAFA1Q96PS6 74 aa10.46□□□□□ -0.73
TRIM35-201ENST00000305364 SIGLEC8Q9NYZ4 499 aa10.46□□□□□ -0.73
TRIM35-201ENST00000305364 E7EUB6 86 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 G3V4G9 280 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 CRXO43186 299 aaPredicted RBP10.46□□□□□ -0.74
TRIM35-201ENST00000305364 SFTA2Q6UW10 78 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 C1RLQ9NZP8 487 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 LAMA1P25391 3075 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 NCKAP5O14513 1909 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 EVI2AP22794 236 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 URB1-AS1Q96HZ7 61 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 KLK15Q9H2R5 256 aa10.46□□□□□ -0.74
TRIM35-201ENST00000305364 MRPL36Q9P0J6 103 aaKnown RBP10.46□□□□□ -0.74
TRIM35-201ENST00000305364 K7ERJ3 54 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 CCL21O00585 134 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 SCGB1C2P0DMR2 95 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 BMI1P35226 326 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 RAB1BQ9H0U4 201 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 ETDBQ3ZM63 59 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 TPSG1Q9NRR2 321 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 TECTAO75443 2155 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 IGHV1-46P01743 117 aa10.45□□□□□ -0.74
TRIM35-201ENST00000305364 TET2Q6N021 2002 aaPredicted RBP10.44□□□□□ -0.74
TRIM35-201ENST00000305364 IGHV3-35A0A0C4DH35 117 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 DIAPH2-AS1Q14236 149 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 LGALS9BQ3B8N2 356 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 LGALS9CQ6DKI2 356 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 CHAC1Q9BUX1 264 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 TMEM133Q9H2Q1 129 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 PPIFP30405 207 aaKnown RBP10.44□□□□□ -0.74
TRIM35-201ENST00000305364 NPFFR1Q9GZQ6 430 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 NPIPB5A8MRT5 1133 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 FAM120AOSQ5T036 256 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 FAM169BQ8N8A8 192 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 DKK2Q9UBU2 259 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 SONP18583 2426 aaKnown RBP10.44□□□□□ -0.74
TRIM35-201ENST00000305364 H3BVH4 76 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 IGKCP01834 107 aa10.44□□□□□ -0.74
TRIM35-201ENST00000305364 CSPG4Q6UVK1 2322 aa10.43□□□□□ -0.74
TRIM35-201ENST00000305364 IGHV3OR16-8A0A075B7F1 116 aa10.43□□□□□ -0.74
TRIM35-201ENST00000305364 CKS1BP61024 79 aa10.43□□□□□ -0.74
TRIM35-201ENST00000305364 CFAP54Q96N23 3096 aa10.43□□□□□ -0.74
TRIM35-201ENST00000305364 NDUFA3O95167 84 aa10.43□□□□□ -0.74
TRIM35-201ENST00000305364 FAM106CPP0CH98 169 aa10.43□□□□□ -0.74
TRIM35-201ENST00000305364 FAM106AQ4KMX7 169 aa10.43□□□□□ -0.74
TRIM35-201ENST00000305364 TTTY13Q9BZ97 58 aa10.43□□□□□ -0.74
TRIM35-201ENST00000305364 PSMB11A5LHX3 300 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 FAM27E3Q08E93 113 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 GAGE13Q4V321 117 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 TMEM200BQ69YZ2 307 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 ONECUT1Q9UBC0 465 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 KLF12Q9Y4X4 402 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 CGB1A6NKQ9 187 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 DPM2O94777 84 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 FAM104BQ5XKR9 115 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 PPP1R27Q86WC6 154 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 THAP8Q8NA92 274 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 JMJD8Q96S16 334 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 SLC25A15Q9Y619 301 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 C22orf46C9J442 243 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 RNF125Q96EQ8 232 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 C8orf49Q96NF6 230 aa10.42□□□□□ -0.74
TRIM35-201ENST00000305364 IGKV2-40A0A087WW87 121 aaPredicted RBP10.41□□□□□ -0.74
TRIM35-201ENST00000305364 OR11H12B2RN74 326 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 J3KRW8 73 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 K7EMI3 77 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 IGKV2D-40P01614 121 aaPredicted RBP10.41□□□□□ -0.74
TRIM35-201ENST00000305364 LOXL1Q08397 574 aaPredicted RBP10.41□□□□□ -0.74
TRIM35-201ENST00000305364 OR11H1Q8NG94 326 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 OR11H2Q8NH07 326 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 ZNF418Q8TF45 676 aaPredicted RBP10.41□□□□□ -0.74
TRIM35-201ENST00000305364 PRSS22Q9GZN4 317 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 CCDC168Q8NDH2 2452 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 C19orf71A6NCJ1 209 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 GAGE12HA6NDE8 117 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 CD59P13987 128 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 SPANXN1Q5VSR9 72 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 C2orf91Q6ZV80 131 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 TNFRSF14Q92956 283 aa10.41□□□□□ -0.74
TRIM35-201ENST00000305364 C17orf77Q96MU5 243 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms